Sequence Similarity Clusters for the Entities in PDB 6J0B

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Pvc2 protein, length: 355 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 1849
95 % 2 3 2441
90 % 2 3 2483
70 % 2 3 2540
50 % 2 3 2572
40 % 7 8 2142
30 % 7 8 2197
Entity #2 | Chains: a,b,c,d,e,f,g,h,i,j,k,l
Pvc1 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 2478
95 % 3 3 3146
90 % 3 3 3233
70 % 6 6 2530
50 % 6 6 2562
40 % 6 6 2573
30 % 6 6 2561

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6RGL 1 A, B Afp2 42906
2 6RBN 2 C Afp2 42906
3 6RC8 1 A Afp2 42906
4 6RAP 2 C Afp2 42906
5 6RAO 2 C Afp2 42906
6 6J0N 6 h, i, j, k, l, m Pvc2 291112
7 6J0B 1 A, B, C, D, E, F, G, H, I, J, K, L Pvc2 291112
8 6J0C 1 A, B, C, D, E, F, a, b, c, d, e, f Pvc2 291112