Sequence Similarity Clusters for the Entities in PDB 6J0B

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Pvc2 protein, length: 355 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 1776
95 % 2 3 2356
90 % 2 3 2407
70 % 2 3 2465
50 % 2 3 2479
40 % 7 8 2044
30 % 7 8 2082
Entity #2 | Chains: a,b,c,d,e,f,g,h,i,j,k,l
Pvc1 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 2381
95 % 3 3 3046
90 % 3 3 3120
70 % 6 6 2530
50 % 6 6 2543
40 % 6 6 2557
30 % 6 6 2541

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6J0N 8 1, 2, 3, 4, 5, z Pvc1 291112
2 6J0F 2 a, b, c, d, e, f Pvc1 291112
3 6J0B 2 a, b, c, d, e, f, g, h, i, j, k, l Pvc1 291112