Sequence Similarity Clusters for the Entities in PDB 6J0F

Entity #1 | Chains: A,B,C,D,E,F
Pvc16 protein, length: 293 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 14694
95 % 1 1 14659
90 % 1 1 14958
70 % 1 1 13597
50 % 2 2 11049
40 % 2 2 10248
30 % 2 2 9597
Entity #2 | Chains: a,b,c,d,e,f
Pvc1 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 2392
95 % 2 3 3040
90 % 2 3 3122
70 % 5 6 2524
50 % 5 6 2531
40 % 5 6 2560
30 % 5 6 2538

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures