Sequence Similarity Clusters for the Entities in PDB 6M9Y

Entity #1 | Chains: A,C
Fluorescent protein lanFP6A protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47524
95 % 1 1 36591 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 32738
70 % 1 1 31299
50 % 1 1 27287
40 % 1 1 24808
30 % 1 1 22007
Entity #2 | Chains: B,D
Fluorescent protein lanFP6A protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49905
95 % 1 1 30016 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 36435
70 % 1 1 31298
50 % 1 1 28271
40 % 1 1 24807
30 % 1 1 22006

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures