Sequence Similarity Clusters for the Entities in PDB 6M9Y

Entity #1 | Chains: A,C
Fluorescent protein lanFP6A protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54175
95 % 1 1 38019 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 36299
70 % 1 1 32300
50 % 1 1 28138
40 % 1 1 25642
30 % 1 1 22768
Entity #2 | Chains: B,D
Fluorescent protein lanFP6A protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54174
95 % 1 1 38017 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 36297
70 % 1 1 32299
50 % 1 1 28137
40 % 1 1 25641
30 % 1 1 22767

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures