6MSB

Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome


Sequence Similarity Clusters for the Entities in PDB 6MSB

Entity #1 | Chains: U
26S proteasome non-ATPase regulatory subunit 1 protein, length: 953 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1906
95 % 1 31 2127
90 % 1 31 2164
70 % 1 32 2133
50 % 1 32 2184
40 % 7 56 1229
30 % 7 56 1272
Entity #10 | Chains: d
26S proteasome non-ATPase regulatory subunit 8 protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 16 3985
95 % 1 16 4756
90 % 1 20 3789
70 % 1 20 3788
50 % 1 20 3714
40 % 1 20 3702
30 % 1 20 3617
Entity #11 | Chains: e
26S proteasome complex subunit SEM1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 33 1482
95 % 5 33 1922
90 % 5 33 1959
70 % 5 33 2010
50 % 5 35 1917
40 % 5 35 1948
30 % 5 35 1985
Entity #12 | Chains: f
26S proteasome non-ATPase regulatory subunit 2 protein, length: 908 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1769
95 % 1 33 1973
90 % 1 33 2023
70 % 1 30 2358
50 % 1 30 2375
40 % 6 53 1329
30 % 6 53 1363
Entity #13 | Chains: A
26S proteasome regulatory subunit 7 protein, length: 433 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1902
95 % 1 25 2693
90 % 1 25 2799
70 % 6 49 1374
50 % 6 49 1395
40 % 6 49 1437
30 % 6 49 1473
Entity #14 | Chains: B
26S proteasome regulatory subunit 4 protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2710
95 % 1 21 3322
90 % 1 21 3398
70 % 6 39 1712
50 % 6 39 1739
40 % 6 39 1782
30 % 6 39 1806
Entity #15 | Chains: C
26S proteasome regulatory subunit 8 protein, length: 398 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1714
95 % 1 30 2251
90 % 1 30 2264
70 % 6 55 1208
50 % 6 77 576
40 % 11 147 369
30 % 11 147 383
Entity #16 | Chains: D
26S proteasome regulatory subunit 6B protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1926
95 % 1 31 2089
90 % 1 31 2173
70 % 1 31 2191
50 % 6 55 1227
40 % 6 55 1266
30 % 11 101 682
Entity #17 | Chains: E
26S proteasome regulatory subunit 10B protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1890
95 % 1 31 2080
90 % 1 31 2134
70 % 1 31 2181
50 % 6 49 1394
40 % 12 147 369
30 % 12 147 383
Entity #18 | Chains: F
26S proteasome regulatory subunit 6A protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1933
95 % 1 22 3083
90 % 1 22 3093
70 % 1 22 3197
50 % 6 46 1476
40 % 6 46 1504
30 % 12 101 682
Entity #19 | Chains: u,w
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1502
95 % 399 490 6
90 % 408 504 6
70 % 458 555 9
50 % 470 570 10
40 % 470 574 12
30 % 481 591 20
Entity #2 | Chains: V
26S proteasome non-ATPase regulatory subunit 3 protein, length: 534 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1896
95 % 1 31 2144
90 % 1 31 2182
70 % 1 31 2249
50 % 1 31 2235
40 % 1 31 2318
30 % 1 31 2328
Entity #20 | Chains: G,g
Proteasome subunit alpha type-6 protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 48 487
95 % 22 52 567
90 % 22 52 591
70 % 22 52 620
50 % 309 361 42
40 % 314 367 45
30 % 1929 2273 2
Entity #21 | Chains: H,h
Proteasome subunit alpha type-2 protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 43 513
95 % 22 51 565
90 % 22 51 592
70 % 22 51 623
50 % 25 55 597
40 % 314 366 43
30 % 1930 2273 2
Entity #22 | Chains: I,i
Proteasome subunit alpha type-4 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 43 514
95 % 22 51 566
90 % 22 51 590
70 % 22 51 619
50 % 312 364 37
40 % 314 366 44
30 % 1931 2273 2
Entity #23 | Chains: J,j
Proteasome subunit alpha type-7 protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 42 537
95 % 22 52 560
90 % 22 52 583
70 % 22 52 616
50 % 311 363 38
40 % 325 393 17
30 % 1932 2273 2
Entity #24 | Chains: K,k
Proteasome subunit alpha type-5 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 46 454
95 % 22 51 563
90 % 22 51 585
70 % 22 51 612
50 % 313 365 36
40 % 313 365 46
30 % 1933 2273 2
Entity #25 | Chains: L,l
Proteasome subunit alpha type-1 protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 42 532
95 % 22 52 556
90 % 22 52 577
70 % 22 52 607
50 % 22 52 654
40 % 22 52 681
30 % 22 52 725
Entity #26 | Chains: M,m
Proteasome subunit alpha type-3 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 44 440
95 % 23 52 470
90 % 23 52 497
70 % 23 52 530
50 % 59 97 323
40 % 61 99 328
30 % 1934 2273 2
Entity #27 | Chains: N,n
Proteasome subunit beta type-6 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 1924
95 % 1 17 2454
90 % 1 21 2137
70 % 1 21 2233
50 % 1 21 2242
40 % 1 21 2260
30 % 1 21 2266
Entity #28 | Chains: O,o
Proteasome subunit beta type-7 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 1911
95 % 1 17 2481
90 % 1 21 2167
70 % 1 21 2215
50 % 4 24 1866
40 % 4 24 1894
30 % 4 24 1924
Entity #29 | Chains: P,p
Proteasome subunit beta type-3 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 42 538
95 % 22 51 555
90 % 22 51 587
70 % 22 51 615
50 % 309 357 43
40 % 314 363 47
30 % 314 363 48
Entity #3 | Chains: W
26S proteasome non-ATPase regulatory subunit 12 protein, length: 456 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1850
95 % 1 32 2019
90 % 1 32 2068
70 % 1 32 2118
50 % 1 32 2172
40 % 6 56 1242
30 % 6 56 1287
Entity #30 | Chains: Q,q
Proteasome subunit beta type-2 protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 42 534
95 % 22 51 568
90 % 22 51 589
70 % 22 51 617
50 % 22 51 668
40 % 311 360 48
30 % 313 362 49
Entity #31 | Chains: R,r
Proteasome subunit beta type-5 protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 16 2125
95 % 1 16 2687
90 % 1 20 2320
70 % 1 20 2396
50 % 2 21 2244
40 % 2 21 2262
30 % 2 21 2267
Entity #32 | Chains: S,s
Proteasome subunit beta type-1 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 18 1770
95 % 2 18 2269
90 % 2 22 1998
70 % 2 22 2042
50 % 2 22 2092
40 % 289 328 80
30 % 289 328 85
Entity #33 | Chains: T,t
Proteasome subunit beta type-4 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 18 1750
95 % 2 18 2296
90 % 2 22 2022
70 % 2 22 2068
50 % 2 22 2120
40 % 2 22 2147
30 % 2 22 2174
Entity #4 | Chains: X
26S proteasome non-ATPase regulatory subunit 11 protein, length: 422 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1578
95 % 1 32 2024
90 % 1 32 2073
70 % 3 34 2011
50 % 3 34 2067
40 % 3 34 2055
30 % 3 34 2094
Entity #5 | Chains: Y
26S proteasome non-ATPase regulatory subunit 6 protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1879
95 % 1 32 2065
90 % 1 32 2121
70 % 1 32 2172
50 % 1 32 2228
40 % 1 32 2244
30 % 6 56 1303
Entity #6 | Chains: Z
26S proteasome non-ATPase regulatory subunit 7 protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 3396
95 % 1 21 3342
90 % 1 21 3414
70 % 1 21 3424
50 % 1 21 3377
40 % 7 40 1743
30 % 7 40 1776
Entity #7 | Chains: a
26S proteasome non-ATPase regulatory subunit 13 protein, length: 376 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 1982
95 % 1 32 2036
90 % 1 32 2081
70 % 1 32 2134
50 % 1 32 2185
40 % 1 32 2210
30 % 6 57 1273
Entity #8 | Chains: b
26S proteasome non-ATPase regulatory subunit 4 protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 3439
95 % 1 21 3394
90 % 1 21 3468
70 % 1 21 3480
50 % 1 21 3432
40 % 1 21 3413
30 % 1 21 3342
Entity #9 | Chains: c
26S proteasome non-ATPase regulatory subunit 14 protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1557
95 % 1 32 2040
90 % 1 32 2086
70 % 1 32 2137
50 % 6 57 1189
40 % 6 57 1231
30 % 6 57 1274

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5TOG 1 A Polyubiquitin-B 9606
2 5NVG 1 A Polyubiquitin-B 9606
3 5TOF 1 A Polyubiquitin-B 9606
4 4XOF 1 A Ubiquitin 9606
5 3A9J 1 A Ubiquitin 10090
6 3A9J 2 B Ubiquitin 10090
7 5GOB 1 A Ubiquitin 9606
8 5GOB 2 B D-ubiquitin 9606
9 5W46 1 A, B Polyubiquitin-B 9606
10 5GOD 1 A, B Ubiquitin 9606
11 5GOD 2 C, D D-ubiquitin 9606
12 5XVE 2 B Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9913
13 3NHE 2 B Ubiquitin 9606
14 5DK8 1 A, B Polyubiquitin-B Ubiquitin, UNP residues 2-75 9606
15 1YJ1 1 A, B, C Ubiquitin residues 1-76
16 5NL4 1 A, B, C Polyubiquitin-C 9606
17 5V1Y 2 C, D Ubiquitin 9606
18 4M0W 2 B Ubiquitin 9913
19 4Y1H 1 A Ubiquitin-40S ribosomal protein S27a K33 linked tri-Ubiquitin. 9913
20 2GBJ 1 A, B Ubiquitin 9606
21 1YIW 1 A, B, C Ubiquitin 9031
22 1OGW 1 A UBIQUITIN LEF IS (4S)-5-FLUORO-L-LEUCINE RESIDUES 1-76 9606
23 2WWZ 1 A, B UBIQUITIN 9913
24 5KYC 2 C Polyubiquitin-B UNP residues 1-76 9606
25 4IUM 2 B Ubiquitin UNP residues 1-75 9606
26 4GU2 1 A Ubiquitin 5759
27 3A9K 1 A Ubiquitin 10090
28 3A9K 2 B Ubiquitin 10090
29 4HK2 1 A, B, C, D Ubiquitin 9606
30 5KYF 2 C Polyubiquitin-B UNP residues 1-76 9606
31 1XD3 2 B, D UBC protein 9606
32 5NLF 1 A, B, C Polyubiquitin-C 9606
33 4ZPZ 1 A, B Polyubiquitin-B ubiquitin, UNP residues 1-73 9606
34 6E2B 1 A, C, E, G, I, P Ubiquitin 9913
35 4UN2 1 A UBIQUITIN 9606
36 5VBT 1 A, B UBH04 32630
37 6FFA 2 B Ubiquitin-like protein ISG15 9606
38 4PIH 1 A, B Ubiquitin 9606
39 2ZCC 1 A, B, C Ubiquitin 9913
40 6NYO 2 E Ubiquitin 4896
41 4PIJ 1 A, B Ubiquitin 9606
42 5NLI 1 A, B, C Polyubiquitin-C 9606
43 3PHX 2 B Ubiquitin-like protein ISG15 UNP residues 79-156 9606
44 5O6T 2 C, D Polyubiquitin-B A variant of ubiquitin identified from a phage-display library 9606
45 5YT6 1 A, C, E, G Ubiquitin 9606
46 4V3L 2 B, D POLYUBIQUITIN-C G76 IN CHAIN B IS COVALENTLY LINKED TO K85 SIDE CHAIN IN CHAIN A. RESIDUES 77-152 9606
47 4LJO 2 B Polyubiquitin-C unp residues 77-152 9913
48 4FBJ 2 B NEDD8 9606
49 3BY4 2 B Ubiquitin 9606
50 6FDK 2 B Polyubiquitin-B 9606
51 5K9P 1 A Polyubiquitin-B 9606
52 5NLJ 1 A, B, C Polyubiquitin-B 9606
53 5KYD 1 D Polyubiquitin-B UNP residues 1-76 9606
54 4XYZ 1 A, B Polyubiquitin-C UNP residues 77-152 9913
55 3M3J 1 A, B, C, D, E, F Ubiquitin 9913
56 2ZNV 2 B, E Ubiquitin 10090
57 2ZNV 3 C, F Ubiquitin 10090
58 2GBM 1 A, B, C, D Ubiquitin 9606
59 5OXH 1 A Ubiquitin T66V/L67N mutant 9606
60 5EMZ 1 A, C, E Polyubiquitin-B 9606
61 5EMZ 2 B, D, F Polyubiquitin-B 9606
62 6B7M 2 B, C Polyubiquitin-C 9606
63 6HEI 2 B Polyubiquitin-B 9606
64 3VUX 1 A, B, C Polyubiquitin-C Ubiquitin 9606
65 2GBN 1 A Ubiquitin 9606
66 2ZCB 1 A, B, C Ubiquitin 9606
67 5OXI 1 A, B Ubiquitin L67S mutant 9606
68 4K1R 2 B, D Polyubiquitin-C 9606
69 6HPR 2 B, D Polyubiquitin-B Ubiquitin residues 1-76 contains N-terminal GSGGS after TEV cleavage. Chain D Gly76 forms isopeptide linkage with Chain C Lys85. 9606
70 3PRP 2 B, D Ubiquitin 9606 3.4.19.12 | Details
71 4I6N 2 B, D Ubiquitin 9606
72 2ZEQ 1 A E3 ubiquitin-protein ligase parkin Ubiquitin-like domain 10090 2.3.2.31 | Details
73 3V6C 2 B Ubiquitin 9606
74 5AF5 1 A POLYUBIQUITIN-C 9606
75 5J8P 1 A ubiquitin 9606
76 5J8P 2 B D-ubiquitin 9606
77 1NDD 1 A, B, C, D PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8) HUMAN NEDD8 UBIQUITIN-LIKE PROTEIN MONOMER WITH 4 MOLECULES IN THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT 9606
78 4K7U 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
79 6EI1 2 B Polyubiquitin-B 9606
80 6FGE 2 C Polyubiquitin-B 9606
81 2J7Q 2 B, D UBIQUITIN THE C-TERMINAL GLY 76 IS REPLACED BY THE VINYLMETHYLESTER MOIETY UBIQUITIN FUSED TO VINYLMETHYLESTER, UBVME, RESIDUES 1-75 9606
82 3NS8 1 A, B Ubiquitin 9606
83 5GOJ 1 A Ubiquitin 9606
84 5GOJ 2 B D-ubiquitin 9606
85 6OI4 2 C, D ubiquitin 9606
86 1UBI 1 A UBIQUITIN 9606
87 2D3G 1 A, B ubiquitin 9913
88 5GOC 1 A Ubiquitin 9606
89 5GOC 2 D D-ubiquitin 9606
90 5X3N 1 A Polyubiquitin-B UNP residues 1-76 9606
91 5XIU 2 B Ubiquitin-40S ribosomal protein S27a 10090
92 5TXK 2 B Polyubiquitin-B 9606
93 5WFI 2 C, D Ubiquitin 9606
94 1UBQ 1 A UBIQUITIN 9606
95 6B7O 2 B, C Polyubiquitin-C 9606
96 4ZFR 2 B ubiquitin unp residues 77-152 9606
97 4MSM 2 B, D Ubiquitin UNP residues 77-152 9606
98 4HJK 1 A Ubiquitin UNP residues 87-162 9606
99 6GLC 2 B Polyubiquitin-B 9606
100 3N32 1 A Ubiquitin 9606
101 5L8H 2 B Polyubiquitin-B Recombinant expression followed by chemical synthesis. 9606
102 3ONS 1 A Ubiquitin 9606
103 5XU8 2 B Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9913
104 3MHS 4 D Ubiquitin 9606
105 5M93 1 A, B, C Polyubiquitin-B 9606
106 4K7W 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
107 2HD5 2 B Polyubiquitin residues 1-76 9913
108 5NMC 1 A, B, C Polyubiquitin-C 9606
109 5GOI 1 A, B Ubiquitin 9606
110 5GOI 2 C, D D-ubiquitin 9606
111 1WRD 2 B Ubiquitin 9913
112 5GVI 2 B ubiquitin 10090
113 5GVI 3 C ubiquitin 10090
114 4K7S 1 A, B, C ubiquitin UNP residues 1-73 9606 6.3.2.19 | Details
115 2BKR 2 B NEDDYLIN 9606
116 3B1L 1 X E3 ubiquitin-protein ligase parkin Ubiquitin-like domain 10090 2.3.2.31 | Details
117 5CVM 2 B Polyubiquitin-B UNP residues 1-76 9606
118 2FCS 1 A, B Ubiquitin residues 1-76
119 4Q5E 2 B Polyubiquitin 4932 6.3.2.19 | Details
120 5V1Z 2 C, D Ubiquitin 9606
121 3ALB 1 A, B, C, D ubiquitin 9606
122 6GZS 2 B Polyubiquitin-B 9606
123 5D0M 3 B Polyubiquitin-B UNP residues 1-76 9606
124 5XIS 2 B, E Ubiquitin-40S ribosomal protein S27a 10090
125 5XIS 3 C, F Ubiquitin-40S ribosomal protein S27a 10090
126 4PIG 1 A, B, C, D Ubiquitin 9606
127 5X3M 1 A Polyubiquitin-B 9606
128 5X3M 2 D D-ubiquitin D-Ub-S65E-NH2 9606
129 5NL5 1 A, B, C Polyubiquitin-B 9606
130 6ML1 2 C, E Ubiquitin variant 15.1a This is a Ubv (ubiquitin variant) selected by phage display to bindthe USP15 USP domain with high affinity 9606
131 4MSQ 2 B, D Ubiquitin UNP residues 77-152 9606
132 4LDT 2 B Ubiquitin aldehyde 9606
133 4LDT 4 D Ubiquitin 9606
134 3VUW 1 A, B, C Polyubiquitin-C Ubiquitin 9606
135 3TMP 2 B, D, F, H Polyubiquitin-C Ubiquitin-like 1 9606
136 2QHO 1 A, C, E, G Ubiquitin 9913
137 3H7P 1 A Ubiquitin 9606
138 3H7P 2 B Ubiquitin 9606
139 4WZP 1 A, B, C, D, E, F, G, H ubiquitin phosphorylation at Ser65 UNP residues 1-76 9606
140 3EHV 1 A, B, C Ubiquitin 9606 6.3.2.19 | Details
141 5GO7 1 A Ubiquitin 9606
142 5GO7 2 B D-ubiquitin 9606
143 6CPM 2 E, F Ubiquitin variant 15.1d This is a Ubv (ubiquitin variant) selected by phage display to bind the USP15 USP domain with high affinity 9606
144 1P3Q 2 U, V Ubiquitin 9913
145 2OOB 2 B Ubiquitin 9913
146 5ULF 2 B, D Ubiquitin 9606
147 5KYE 2 C, D Polyubiquitin-B UNP residues 1-76 9606
148 6ISU 2 B Ubiquitin 9606
149 6ISU 3 C Ubiquitin 9606
150 4F8C 2 B, D NEDD8 9606
151 5ULH 2 B Ubiquitin 9606
152 3HM3 1 A, B, C, D Ubiquitin 9606
153 5LRW 2 B, D Polyubiquitin-B Gly76 was replaced with 2-bromoethylamine 9606
154 5GOK 1 A Ubiquitin 9606
155 5GOK 2 B D-ubiquitin 9606
156 4WLR 3 C Polyubiquitin-B 9606
157 3WWQ 1 A, D, G, J Ubiquitin 10090
158 3WWQ 2 B, E, H, K Ubiquitin 10090
159 5JG6 2 B, C Polyubiquitin-B 9606
160 3EFU 1 A Ubiquitin 9606
161 4Q5H 2 B Polyubiquitin 4932 6.3.2.19 | Details
162 5AF4 1 A, B, C, D, E, F, G, H UBIQUITIN ISOPEPTIDE LINKAGES BETWEEN A76 C AND B33 NZ, C76 C AND D33 NZ, E76 C AND F33 NZ 9606
163 4V3K 2 B, E POLYUBIQUITIN-C LYS85 IN CHAINS A AND D IS COVALENTLY LINKED TO GLY76 IN CHAINS B AND E, RESPECTIVELY. RESIDUES 77-152 9606
164 6OAR 2 B, D, F, H Interferon stimulated gene 17 9940
165 4IG7 2 B Ubiquitin 9606
166 2JF5 1 A, B UBIQUITIN ISO-PEPTIDE LINK BETWEEN A-LYS63 AND B-GLY76 9606
167 5MN9 1 A, B Ubiquitin-40S ribosomal protein S27a 9913
168 5WVO 1 A, B Ubiquitin 9606
169 3V6E 2 B Ubiquitin 9606
170 1UZX 2 B UBIQUITIN 9913
171 5YDR 1 A, D Polyubiquitin-B UNP residues 1-73 9606
172 1S1Q 2 B, D ubiquitin 9606
173 6NYA 2 B, E Ubiquitin residues 77-152 4565
174 4LJP 2 B Polyubiquitin-C unp residues 77-152 9913
175 3VUY 1 A, B, C Polyubiquitin-C Ubiquitin 9606
176 3PHW 2 B, D, F, H Ubiquitin-40S ribosomal protein S27a UNP residues 1-75 9606
177 4PQT 2 B Protein UBBP4 unp residues 77-152 9606
178 5BZ0 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin from bovine erythrocytes 9913
179 2GBR 1 A, B, C Ubiquitin 9606
180 2FAZ 1 A, B Ubiquitin-like containing PHD and RING finger domains protein 1 UBIQUITIN-LIKE DOMAIN 9606 2.3.2.27 | Details
181 4XKL 1 A, C Ubiquitin 9606
182 4FJV 2 B, D Polyubiquitin-C 9606
183 5DFL 1 B Ubiquitin 9606
184 2C7N 2 B, D, F, H, J, L UBIQUITIN 9913
185 5HPS 2 B Ubiquitin variant P1.1 9606
186 5GOH 1 A Ubiquitin 9606
187 5GOH 2 D D-ubiquitin 9606
188 3ZNI 4 D, H, L, P POLYUBIQUITIN-C CARBONYL CARBON OF G76 IN CHIANS D, H, L AND P FORMS AN ISOPEPTIDE LINKAGE WITH THE SIDECHAIN OF K85 IN CHAINS C, G, K AND O, RESPECTIVELY. GSGGS LINKER AT THE N- TERMINUS OF PROTEIN RESULTED FROM CLONING RESIDUES 77-152 9606
189 2G45 2 B, E Ubiquitin 9606
190 6AQR 4 D Polyubiquitin-C 9606
191 5MNJ 2 B, F Polyubiquitin-B gsggs linker at the N-terminus resulted from cloning. G76 in chain B is covalently linked to K85 side chain in Chain A. 9606
192 5ZQ3 2 C, D Ubiquitin 9606
193 5ZQ4 2 C, D ubiquitin 9606
194 4GSW 1 A, B Ubiquitin 5759
195 4RF1 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
196 1SIF 1 A ubiquitin 9606
197 5JBY 1 A, C, E ubiquitin 9606
198 5JBY 2 B, D, F D-ubiquitin 9606
199 5IFR 2 B Polyubiquitin-B 9606
200 2IBI 2 B Ubiquitin 9606
201 5L6H 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
202 6D4P 2 C Ubiquitin Variant Ubv.D1.1 9606
203 6JB7 1 B Ubiquitin 9606
204 5GOG 1 A Ubiquitin 9606
205 5GOG 2 B D-ubiquitin 9606
206 2GBK 1 A, B, C, D Ubiquitin 9606
207 4AUQ 3 C, F POLYUBIQUITIN-C UBIQUITIN, RESIDUES 1-76 9606
208 4NNJ 2 B, D, E Uba1 UNP residues 1-76 4932
209 4Z9S 1 A, B, C, D Ubiquitin-40S ribosomal protein S27a UNP RESIDUES 1-76 9913
210 6DGF 2 B Polyubiquitin-B 9606
211 2XEW 1 A, B, C, D, E, F, G, H, I, J, K, L UBIQUITIN UBIQUITIN POLYMER LINKED THROUGH LYS11 IN AN ISOPEPTIDE LINKAGE 9606
212 2WDT 2 B, D UBIQUITIN C-TERMINAL GLY76 OF WILDTYPE UBIQUITIN IS REPLACED BY A VINYL METHYLESTER MOIETY (UBVME) RESIDUES 1-75 9606
213 1XT9 2 B Neddylin 9606
214 1AAR 1 A, B DI-UBIQUITIN 9913
215 4AP4 3 C, F UBIQUITIN C ISOPEPTIDE AMIDE LINKED TO UBCH5A (CHAIN B AND CHAIN E) RESIDUES 76-152 9606
216 4UEL 2 B POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH-L5 9606
217 4II2 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 4896
218 6OQ1 1 A, B Ubiquitin 9606
219 6OQ1 2 C, D Ubiquitin 9606
220 6OQ1 3 E, F Ubiquitin 9606
221 6RYA 2 B, D, F Polyubiquitin-C 9606
222 4ZFT 2 B, D Polyubiquitin-B unp residues 77-152 9606
223 2WX0 1 A, B, E, F UBIQUITIN 9913
224 3A1Q 1 A, D Ubiquitin 10090
225 3A1Q 2 B, E Ubiquitin 10090
226 5HPL 2 C, D Ubiquitin variant R5.4 9606
227 5TR4 2 B, D Ubiquitin 9913
228 4BOS 2 C, E POLYUBIQUITIN-C RESIDUES 1-76 9606
229 3H7S 1 A, B Ubiquitin 9606
230 3C0R 2 B, D Ubiquitin 9606
231 5AIU 3 C, F POLYUBIQUITIN-C CHAIN B COVALENTLY LINKED TO CHAINS C, CHAIN E IS COVALENTLY LINKED TO CHAIN F UNP RESIDUES 1-76 9606
232 6PGV 2 B Polyubiquitin-B 9606
233 4S22 1 A, B, C, D Ubiquitin residues 77-152 9913
234 2C7M 2 B UBIQUITIN 9913
235 1TBE 1 A, B TETRAUBIQUITIN 9606
236 6NXK 1 A, B Polyubiquitin-C 9606
237 3PT2 2 B Ubiquitin B 9606
238 5VZW 2 C, D Ubiquitin 9606
239 5JZE 1 B, D Ubiquitin-like protein ISG15 C-terminal 10090
240 3PRM 2 B, D Ubiquitin 9606 3.4.19.12 | Details
241 4R62 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin 9606
242 5EYA 3 C, D Polyubiquitin-B UNP residues 1-76 9606
243 5GO8 1 A ubiquitin 9606
244 5GO8 2 B D-ubiquitin 9606
245 3A33 2 B Ubiquitin 9606
246 3VHT 3 C Ubiquitin 10090
247 5XIT 1 D, F Ubiquitin-40S ribosomal protein S27a 10090
248 5XIT 3 B, H Ubiquitin-40S ribosomal protein S27a 10090
249 6ASR 1 A, C Ubiquitin residues 1-76 9606
250 2FCN 1 A, B Ubiquitin residues 1-76
251 4DHJ 2 B, F, J, M Ubiquitin aldehyde 9606
252 4DHJ 3 D, H Ubiquitin 9606
253 3ZNH 2 B POLYUBIQUITIN-B GLY76 IS REPLACED WITH A PROPARGYL GROUP 9606
254 4BBN 2 C POLYUBIQUITIN-B RESIDUES 1-76 9913
255 4BBN 3 F POLYUBIQUITIN-B RESIDUES 229-304 9913
256 4NQL 2 B Ubiquitin 10090
257 4NQL 3 C Ubiquitin 10090
258 6NJG 2 C Polyubiquitin-B 9606
259 1NBF 2 C, D Ubiquitin aldehyde 9606
260 2O6V 1 A, C, E, G Ubiquitin 9606
261 2O6V 2 B, F Ubiquitin 9606
262 2O6V 3 D, H Ubiquitin 9606
263 3OFI 2 C, D Ubiquitin 9606
264 5TL7 1 A, C Ubiquitin-like protein ISG15 C-terminal domain (UNP residues 78-155 10090
265 3AUL 1 A, B Polyubiquitin-C Ubiquitin 9606
266 3UGB 2 B Polyubiquitin-C unp residues 1-76 9606
267 5JBV 1 A Ubiquitin 9606
268 5JBV 2 B D-ubiquitin 9606
269 5X3O 1 A Polyubiquitin-B UNP residues 1-76 9606
270 5X3O 2 D D-ubiquitin 9606
271 5ULK 2 B Ubiquitin 9606
272 5ZQ5 2 B, D Ubiquitin 9606
273 6FX4 2 B, D Polyubiquitin-B 9606
274 3NOB 1 A, B, C, D, E, F, G, H Ubiquitin 9606
275 6CRN 2 E, F, G, H Ubiquitin variant 15.2 This is a Ubv (ubiquitin variant) selected by phage display to bind the USP15 USP domain with high affinity 9606
276 6D68 2 C, D Ubv.G1.1 9606
277 6QK9 1 A, B, C, D, E, F, G, H, I, J, K, L Polyubiquitin-B 9606
278 3IFW 2 B Ubiquitin 9606
279 3N3K 2 B Ubiquitin 9606
280 6A6I 2 B, D Polyubiquitin-B UNP residues 1-76 9606
281 6A6I 3 F, H Polyubiquitin-B UNP residues 1-77 9606
282 5W8U 2 B, D Ubiquitin-like protein ISG15 UNP residues 80-156 9606
283 2FCM 1 A, B Ubiquitin residues 1-76
284 6JWI 1 G, I Ubiqutin 10090
285 4KSK 2 C, D Polyubiquitin-C unp residues 76-152 9606
286 5L6J 2 B, D Ubiquitin-40S ribosomal protein S31 4932
287 5HPK 2 B Ubiquitin variant NL.1 9606
288 5OHL 2 I, J, K, L, M, N, O, P Polyubiquitin-B 9606
289 3I3T 2 B, D, F, H Ubiquitin 9606
290 5FER 3 C, F Ubiquitin-40S ribosomal protein S27a 9913
291 5IBK 3 C, F Polyubiquitin-B UNP residues 75-150 9606
292 5OHK 2 B Polyubiquitin-B 9606
293 1CMX 2 B, D PROTEIN (UBIQUITIN YUH1-UBAL) UBIQUITIN C-TERMINUS MODIFIED TO AN ALDEHYDE ALL 9606 3.1.2.15 | Details
294 6JKY 3 C, F Ub 48269
295 3OJ3 1 A, B, C, D, E, F, G, H Ubiquitin Ubiquitin, UNP residues 1-76 9606
296 5N38 2 B Polyubiquitin-B Ser65 is phosphorylated 9606
297 4HCP 2 B NEDD8 unp residues 1-76 9606
298 3O65 2 B, D, F, H Ubiquitin 9606
299 5CRA 2 C, D Polyubiquitin-B UNP residues 1-75 9606
300 6IF1 2 C, D Ubiquitin 9606
301 5TL6 2 A, C Ubiquitin-like protein ISG15 C-terminal domain (UNP residues 80-157) 9606
302 5U4P 3 C Ubiquitin-40S ribosomal protein S31 4932
303 5L6I 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
304 6O82 2 B, D Ubiquitin-60S ribosomal protein L40 residues 1-76 4896
305 5XPK 1 A Ubiquitin 9606
306 5XPK 2 B D-ubiquitin 9606
307 5XDP 1 B D-ubiquitin 9606
308 5XDP 2 A ubiquitin-B K11/48-branched teraubiquitin 9606
309 5O76 3 E, F UbV.pCBL ubiquitin variant 9606
310 5D0K 3 B, E, H, K Polyubiquitin-B UNP residues 1-76 9606
311 5OHV 1 A, C Ubiquitin 9606
312 5KNL 2 B, E Ubiquitin 84753
313 4I6L 2 B Ubiquitin UNP residues 77-150 9606
314 5TUT 2 B Ubiquitin 9606
315 3OLM 2 D Ubiquitin 4932
316 3CMM 2 B, D Ubiquitin 559292
317 4MDK 2 E, F, G, H Ubiquitin UNP residues 76-152 9606
318 5W8T 1 B, D Ubiquitin-like protein ISG15 9606
319 5N2W 2 B Polyubiquitin-B Ser65 is phosphorylated to give SEP65 9606
320 4MM3 1 A Ubiquitin UNP residues 1-76 9606
321 2FIF 1 A, C, E Ubiquitin 9913
322 5JQS 2 D Ubiquitin-40S ribosomal protein S27a 9913
323 5YDK 2 B, E, H, K Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9606
324 5YDK 3 C, D, I, J Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9606
325 2XBB 2 C, D UBIQUITIN 9913
326 2GMI 3 C Ubiquitin 9606
327 4HCN 2 B Polyubiquitin unp RESIDUES 1-76 4932
328 5J26 1 B Ubiquitin Variant i53 9606
329 3DVG 3 X Ubiquitin D77 9606
330 3DVG 4 Y Ubiquitin 9606
331 1WR6 2 E, F, G, H ubiquitin 9913
332 3LDZ 1 E, F, G Ubiquitin 9913
333 3PTF 2 C, D Polyubiquitin-B Ubiquitin 9606
334 6BVA 3 A, B Polyubiquitin-B 9606
335 5ZQ7 2 B, D Ubiquitin 9606
336 3RUL 1 A, B, C, D Ubiquitin 9606
337 5BNB 2 E, F, G, I Polyubiquitin-B 9606
338 5LRX 2 B, D Polyubiquitin-B Gly76 was replaced with propargylamide 9606
339 5CAW 2 B, D Polyubiquitin-B phosphorylated at Ser65 Gly76 exchanged with chemical probe, bromopropylamine. The bromide was lost during the coupling. 9606
340 4XOK 1 A, B, C Ubiquitin 9606
341 3MTN 2 B, D UBIQUITIN VARIANT UBV.21.4 9606
342 5ZQ6 2 B, D Ubiquitin 9606
343 5LRV 2 B Polyubiquitin-B Lys11 was replaced with a diaminobutyric acid (DAB) residue 9606
344 5LRV 3 C Polyubiquitin-B Gly76 was replaced with a ligation handle for diubiquitin probe generation 9606
345 6S53 2 D, F, J, L Polyubiquitin-C 9606
346 3DVN 3 U, X Ubiquitin D77 9606
347 3DVN 4 V, Y Ubiquitin 9606
348 5L8W 3 C Polyubiquitin-B Recombinant expression followed by chemical synthesis 9606
349 1F9J 1 A, B TETRAUBIQUITIN 9606
350 6BYH 3 C, D, H Polyubiquitin-B 9606
351 6NXL 1 A, B, C, D, E, F, G, H Polyubiquitin-B 9606
352 2FID 1 A Ubiquitin 9913
353 5OHP 2 B, C Polyubiquitin-B 9606
354 4HXD 1 A, C Polyubiquitin-C 9606 3.4.19.12 | Details
355 1YD8 1 U, V UBIQUIN 9913
356 4BOZ 2 B, C, E UBIQUITIN-C 9606
357 5HPT 2 B, E, H Ubiquitin variant P2.3 9606
358 3WXG 2 B, E Ubiquitin 10090
359 3WXG 3 C, F Ubiquitin UNP residues 1-72 10090
360 6CP2 3 C Polyubiquitin-B 9606
361 4XKH 1 A, B, D, F, G, I Polyubiquitin-C UNP RESIDUES 77-152 9913
362 3IHP 2 C, D Ubiquitin 9606
363 6D6I 3 C, F Ubv.V1.1 9606
364 5LN1 2 U Polyubiquitin-B 9606
365 3K9P 2 B Ubiquitin 9606
366 3DBH 3 I, J, K, L NEDD8 9606
367 4BVU 3 C UBIQUITIN OXYESTER LINK BETWEEN G76 AND UBCH5C S85 9606
368 6JB6 1 B Ubiquitin 9606
369 5CVN 3 D Polyubiquitin-B UNP residues 1-76 9606
370 3JSV 1 A Ubiquitin 9606
371 3JSV 2 B Ubiquitin 9606
372 3DBL 3 I, J, K, L NEDD8 9606
373 3TBL 2 D, E Ubiquitin 9606
374 2HTH 1 A Ubiquitin 9606
375 3KW5 2 B Ubiquitin 9606
376 6EQI 1 A Ubiquitin 9606
377 5E6J 2 B, E ubiquitin 32630
378 5E6J 3 C, F Polyubiquitin-B 32630
379 2NVU 4 I, J NEDD8 9606
380 2XK5 1 A UBIQUITIN 9606
381 2XK5 2 B UBIQUITIN 9606
382 4JQW 2 C Polyubiquitin-C Ubiquitin 9606
383 4RF0 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
384 3KVF 2 B Ubiquitin 9606
385 6FYH 2 B Polyubiquitin-B 9606
386 6O83 2 B, D Ubiquitin-60S ribosomal protein L40 residues 1-75 4896
387 5AF6 1 A, B, C, D, E UBIQUITIN ISOPEPTIDE BONDS ACROSS BETWEEN CHAINS, A76 C AND D33 NZ, B76 C AND A33 NZ, C76C AND B33 NZ, E76 C AND C33 NZ. ISOPEPTIDE BOND ACROSS THE ASU FOR, D76 C AND E33 NZ SYMM 9606
388 3H1U 1 A, B Ubiquitin 9913
389 6HEK 2 B, D Polyubiquitin-B 9606
390 5JTJ 2 B Polyubiquitin-B 9606
391 2WX1 1 A, B UBIQUITIN 9913
392 4WUR 2 B Polyubiquitin-B UNP residues 1-76 9606
393 4II3 2 B, D Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 4896
394 5C7J 2 C, D Polyubiquitin-C UNP residues 1-74 9606
395 4S1Z 1 A, B, C, D, E Ubiquitin residues 1-76 9606
396 6DC6 2 B, D Ubiquitin 9606
397 4XOL 1 A, B Ubiquitin 9606
398 5JP3 2 B, D, F, H Polyubiquitin-B 9606
399 4P4H 3 S, T, U, W, X Ubiquitin-60S ribosomal protein L40 9606
400 3GZN 3 I, J NEDD8 9606
401 5O44 1 A, E Ubiquitin 7370
402 5O44 2 B, C Polyubiquitin-B 9606
403 5O44 3 D, F Polyubiquitin-B 9606
404 3PHD 2 E, F, G, H Polyubiquitin 9606
405 3DBR 3 I, J, K, L NEDD8 9606
406 5YIK 2 C, D, F ubiquitin UNP RESIDUES 1-76 9606
407 5ZBU 3 E Ubiquitin 9606
408 3N30 1 A, B Ubiquitin 9606
409 4P5O 5 H, K NEDD8 9606
410 3ZLZ 1 A, B UBIQUITIN TRI-UBIQUITIN CHAIN LINKED VIA LYS6. K48R IN BOTH MOLECULES. ISOPEPTIDE LINKAGES ARE NOT RESOLVED. 9606
411 3JVZ 3 X, Y Ubiquitin 9606
412 4DHZ 2 B Ubiquitin aldehyde 9606
413 4DHZ 3 E Ubiquitin 9606
414 5YIJ 2 C, D, G Ubiquitin UNP RESIDUES 1-76 9606
415 3DQV 1 A, B NEDD8 NEDD8 C-terminus covalently linked to Cul5 Lys724 9606
416 5UDH 3 E Ubiquitin C variant Hexa-his N-terminal tagged protein UNP residues 17-92 9606
417 5AIT 3 C, F POLYUBIQUITIN-C UNP RESIDUES 1-76 9913
418 5O6S 1 A, B, C, D, E, F Polyubiquitin-B Variant of ubiquitin identified from phage-display 9606
419 3VFK 1 A ubiquitin, C-terminal fused by Cys-Lys-D-Ala-D-Ala 9606
420 5C7M 2 B, C Polyubiquitin-C UNP residues 1-75 9606
421 1R4M 3 I, J, K, L Ubiquitin-like protein NEDD8 9606
422 3JW0 3 X, Y Ubiquitin 9606
423 4LCD 3 E, F Ubiquitin UNP residues 1-75 9606
424 6DJ9 2 G, H, I, J, K, L Ubiquitin Variant UbV 15.D The following is a variant of ubiquitin selected by phage display to bind to the USP15 N-terminus 9606
425 4DDG 2 D, E, F, G, H, I, M, N, O, P, Q, R Polyubiquitin-C 9606
426 5JTV 2 B, D, F, H Polyubiquitin-B 9606
427 5OHN 2 B, D Polyubiquitin-B 9606
428 5TTE 3 F ubiquitin unp residues 1-76 4565
429 2FCQ 1 A, B Ubiquitin residues 1-76 9031
430 3EEC 1 A, B Ubiquitin 9606
431 5VNZ 3 C, F Ubiquitin 9606
432 6H4H 2 C, D Polyubiquitin-B 9606
433 4NQK 2 E, F, G, H, I, J Ubiquitin UNP residues 76-152 9606
434 6C16 3 D, H Polyubiquitin-B 9606
435 4DDI 2 D, E, F, G, H, I Polyubiquitin-C 9606
436 5H7S 1 E, F Ubiquitin-like 1 9606
437 5EDV 3 E, F, G, H Polyubiquitin-B UNP residues 1-76 9606
438 5CVO 3 C, F Polyubiquitin-B UNP residues 1-76 9606
439 4UF6 2 B, E, H, K POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH- L5 9606
440 5OHM 1 A, C, E, G, I, K Polyubiquitin-C 9606
441 4ZUX 10 X, c, h, m Polyubiquitin-B 9606
442 2DX5 2 B Ubiquitin 9913
443 3OJ4 2 B, E Ubiquitin Ubiquitin, UNP residues 1-76 9606
444 1R4N 3 I, J, K, L Ubiquitin-like protein NEDD8 9606
445 5VO0 3 C, F Ubiquitin 9606
446 6DJW 2 B Ubiquitin 9913
447 2AYO 2 B Ubiquitin 9606
448 5KHY 1 A Polyubiquitin-B 9606
449 5KHY 2 B Polyubiquitin-B 9606
450 6DJX 2 B Ubiquitin 9913
451 4JIO 2 U Ubiquitin 9606
452 4WHV 3 A, F, G, L Polyubiquitin-B unp residues 1-76 9606
453 6VEN 7 K Ubiquitin 9606
454 6V5D 1 A Ubiquitin 9606
455 6UH5 11 Q Ubiquitin 9606
456 6KOW 1 A Polyubiquitin-B 9606
457 6KOX 1 A Polyubiquitin-B 9606
458 6KIU 11 O Ubiquitin 9606
459 6KIV 9 O Ubiquitin 9606
460 6KIW 9 O Ubiquitin 9606
461 6K4I 1 A ubiquitin 9606
462 6OQ2 1 B Ubiquitin 9606
463 6OQ2 2 D Ubiquitin 9606
464 6OQ2 3 E Ubiquitin 9606
465 6R7F 14 N NEDD8 9606
466 6R7I 9 N NEDD8 9606
467 6OB1 1 A Ubiquitin 9606
468 6OB1 2 B Ubiquitin 9606
469 6OA9 2 H, J, K Ubiquitin 4932
470 6OAA 3 H Ubiquitin 4932
471 6O96 8 L Polyubiquitin-B 9606
472 6JMA 7 Y Ubiquitin 9606
473 6J99 7 L Ubiquitin 9606
474 6NQA 7 L Ubiquitin 9606
475 6NOG 5 L Ubiquitin 9606
476 6NN6 8 L Ubiquitin 9606
477 6QF8 1 A Polyubiquitin-B 9606
478 6NJ9 5 L Ubiquitin 9606
479 6N13 2 D ubiquitin 9606
480 6N13 4 A phosphoubiquitin 9606
481 6MSB 19 u, w Ubiquitin 9606
482 6MSD 19 u, w Ubiquitin 9606
483 6MSE 19 u Ubiquitin 9606
484 6MSG 19 u Ubiquitin 9606
485 6FTX 8 N, O Polyubiquitin-B 9606
486 5ZD0 1 A ubiquitin 9606
487 5YMY 1 A Ubiquitin 9606
488 5YMY 2 B Ubiquitin 9606
489 5VZM 1 A Ubiquitin UNP residues 1-76 9606
490 5XK4 1 A Polyubiquitin-B UNP residues 1-76 9606
491 5XK5 1 A Polyubiquitin-B UNP residues 1-76 9606
492 5VEY 2 B Polyubiquitin-B 9606
493 5VF0 1 A Polyubiquitin-B 9606
494 5XBO 1 A Polyubiquitin-B UNP residues 1-76 9606
495 5N9V 1 A NAD(P)(+)--arginine ADP-ribosyltransferase 5911 2.4.2.31 | Details
496 5UJL 1 A, B Ubiquitin residues 1-76 9606
497 5UJN 1 A, B Ubiquitin 9606
498 5TR5 1 A E3 ubiquitin-protein ligase parkin residues 1-76 9606 2.3.2.31 | Details
499 5GO0 1 A Ubiquitin, putative 5691
500 5GJQ 34 y Polyubiquitin-B UNP RESIDUES 1-76 9606
501 5KGF 8 M, O Ubiquitin 9606
502 2NBD 1 A entity 9606
503 2NBE 1 A entity 9606
504 2N7K 1 A NEDD8 9606
505 5A5B 9 9 UBIQUITIN ALDEHYDE 9606
506 2N3U 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
507 2N3V 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
508 2N3W 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
509 2N2K 1 A ubiquitin 9606
510 2N2K 2 B ubiquitin 9606
511 2N13 2 B Ubiquitin 9606
512 2N13 3 C Ubiquitin 9606
513 2MWS 1 A Ubiquitin UNP residues 1-76 9606
514 2MUR 2 B Ubiquitin 9606
515 2MSG 1 A Ubiquitin UNP residuse 1-72 9606
516 2MRO 1 A Polyubiquitin-B Human Ubiquitin 9606
517 2MRE 1 A Polyubiquitin-C unp residues 1-76 9606
518 2MOR 1 A Ubiquitin UNP residues 1-76 9606
519 2MJB 1 A Ubiquitin-60S ribosomal protein L40 Ubiquitin-like 3 domain 9606
520 2MJ5 1 A Polyubiquitin-C UNP residuses 1-76 9606
521 2MI8 1 A Ubiquitin 9606
522 2RU6 1 A Ubiquitin 9606
523 2MCN 2 B Ubiquitin UNP residues 1-76 9606
524 2MBQ 1 A, B Ubiquitin UNP residues 1-76 9606
525 2MBO 1 A, B Ubiquitin UNP residues 1-76 9606
526 2MBH 2 A Ubiquitin 9606
527 2MBB 2 B Polyubiquitin-B UNP P0CG47 residues 1-76 9606
528 2M0X 1 A engineered ubiquitin variant 9606
529 2LZ6 1 A Ubiquitin 9606
530 2LVO 1 A Ubiquitin 9606
531 2LVP 1 A, B Ubiquitin 9606
532 2LVQ 1 A, B Ubiquitin 9606
533 2RSU 1 A Ubiquitin 9606
534 2LRW 1 A Ubiquitin, putative 185431
535 2LJ5 1 A Ubiquitin 9606
536 2LD9 1 A Ubiquitin 9606
537 2L3Z 1 A Ubiquitin UNP Residues 1-76 9606
538 2L0T 1 A Ubiquitin 9606
539 2L0F 1 A Ubiquitin 9606
540 2L00 2 B Ubiquitin ubiquitin core domain 4932
541 2RR9 1 A, B ubiquitin 9606
542 2KWV 2 B Ubiquitin 9606
543 2KWU 2 B Ubiquitin 9606
544 2KTF 1 A Ubiquitin 9606
545 2KOX 1 A Ubiquitin 9606
546 2KO3 1 A NEDD8 9606
547 2KNB 1 A E3 ubiquitin-protein ligase parkin 10116 2.3.2.31 | Details
548 2KN5 1 A Ubiquitin 9606
549 2KLG 1 A Ubiquitin 9606
550 2KJH 2 B Ubiquitin 9606
551 2KHW 2 B Ubiquitin 9606
552 2KDE 2 B, C Ubiquitin 8355
553 2KDF 2 B, C Ubiquitin 9606
554 2K8B 1 A Ubiquitin 9606
555 2K8C 1 A Ubiquitin 9606
556 2K6D 2 B Ubiquitin ubiquitin 9606
557 2K39 1 A Ubiquitin 8355
558 2JZZ 1 A Ubiquitin 9606
559 2JY6 1 A Ubiquitin protein 9606
560 2JWZ 1 A Ubiquitin 4932
561 2JVC 1 A ubiquitin_like protein
562 2JT4 2 B Ubiquitin SH3 domain sequence database residues 350-420 4932
563 2Z59 2 B Ubiquitin 9606
564 2JRI 2 B, C UBC protein sequence database residues 318-469 9606
565 2PE9 1 A, B Ubiquitin 9606
566 2PEA 1 A, B Ubiquitin 9606
567 2NR2 1 A Ubiquitin 9606
568 2DZI 1 A Ubiquitin-like protein 4A ubiquitin-like domain 9606
569 2G3Q 2 B Ubiquitin 4932
570 2DEN 2 B Polyubiquitin-B 9606
571 2FUH 2 B Ubiquitin Ubiquitin 10116
572 1ZW7 1 A Ubiquitin 4932
573 1ZGU 2 B Ubiquitin 9606
574 1WY8 1 A Np95-like ring finger protein, isoform a ubiquitin-like domain 9606 2.3.2.27 | Details
575 2BGF 1 A, B DI-UBIQUITIN ISOPEPTIDE BOND BETWEEN GLY76A AND LYS48B 9606
576 1XQQ 1 A ubiquitin 9606
577 1WR1 1 A Ubiquitin 4932
578 1WH3 1 A 59 kDa 2'-5'-oligoadenylate synthetase like protein ubiquitin like domain 9606
579 1V80 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
580 1V81 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
581 1Q5W 2 B Ubiquitin 9606
582 1Q0W 2 B Ubiquitin 4932
583 1OTR 2 B Ubiquitin 4932
584 1MG8 1 A Parkin ubiquitin-like domain 10090 2.3.2.31 | Details
585 1IYF 1 A parkin ubiquitin-like domain 9606 2.3.2.31 | Details
586 1G6J 1 A UBIQUITIN 9606
587 1FXT 2 B UBIQUITIN 9606
588 1D3Z 1 A PROTEIN (UBIQUITIN) 9606
589 1C3T 1 A PROTEIN (1D8 UBIQUITIN) 9606
590 1UD7 1 A PROTEIN (UBIQUITIN CORE MUTANT 1D7) 9606
591 1BT0 1 A PROTEIN (UBIQUITIN-LIKE PROTEIN 7, RUB1) 3702