6MSB

Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome


Sequence Similarity Clusters for the Entities in PDB 6MSB

Entity #1 | Chains: U
26S proteasome non-ATPase regulatory subunit 1 protein, length: 953 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1867
95 % 1 31 2051
90 % 1 31 2125
70 % 1 32 2081
50 % 1 32 2131
40 % 7 56 1209
30 % 7 56 1254
Entity #10 | Chains: d
26S proteasome non-ATPase regulatory subunit 8 protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 16 3868
95 % 1 16 4552
90 % 1 20 3646
70 % 1 20 3772
50 % 1 20 3695
40 % 1 20 3694
30 % 1 20 3606
Entity #11 | Chains: e
26S proteasome complex subunit SEM1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 33 1386
95 % 5 33 1864
90 % 5 33 1908
70 % 5 33 1955
50 % 5 35 1870
40 % 5 35 1915
30 % 5 35 1939
Entity #12 | Chains: f
26S proteasome non-ATPase regulatory subunit 2 protein, length: 908 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1736
95 % 1 33 1946
90 % 1 33 1986
70 % 1 30 2339
50 % 1 30 2359
40 % 6 53 1312
30 % 6 53 1352
Entity #13 | Chains: A
26S proteasome regulatory subunit 7 protein, length: 433 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2668
95 % 1 25 2644
90 % 1 25 2700
70 % 6 49 1339
50 % 6 49 1363
40 % 6 49 1417
30 % 6 49 1445
Entity #14 | Chains: B
26S proteasome regulatory subunit 4 protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2643
95 % 1 21 3298
90 % 1 21 3371
70 % 6 39 1678
50 % 6 39 1713
40 % 6 39 1766
30 % 6 39 1784
Entity #15 | Chains: C
26S proteasome regulatory subunit 8 protein, length: 398 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1634
95 % 1 30 2117
90 % 1 30 2249
70 % 6 55 1186
50 % 6 77 566
40 % 11 147 366
30 % 11 147 379
Entity #16 | Chains: D
26S proteasome regulatory subunit 6B protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1902
95 % 1 31 2057
90 % 1 31 2104
70 % 1 31 2197
50 % 6 55 1214
40 % 6 55 1253
30 % 11 101 673
Entity #17 | Chains: E
26S proteasome regulatory subunit 10B protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 12 6969
95 % 1 31 2095
90 % 1 31 2137
70 % 1 31 2201
50 % 6 49 1359
40 % 12 147 366
30 % 12 147 379
Entity #18 | Chains: F
26S proteasome regulatory subunit 6A protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1897
95 % 1 22 3045
90 % 1 22 3313
70 % 1 22 3339
50 % 6 46 1453
40 % 6 46 1521
30 % 12 101 673
Entity #19 | Chains: u,w
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1477
95 % 394 485 6
90 % 402 498 6
70 % 451 548 9
50 % 463 563 11
40 % 463 567 14
30 % 473 583 20
Entity #2 | Chains: V
26S proteasome non-ATPase regulatory subunit 3 protein, length: 534 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 1889
95 % 1 31 2090
90 % 1 31 2131
70 % 1 31 2195
50 % 1 31 2241
40 % 1 31 2280
30 % 1 31 2287
Entity #20 | Chains: G,g
Proteasome subunit alpha type-6 protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 48 475
95 % 22 52 550
90 % 22 52 576
70 % 22 52 610
50 % 309 361 42
40 % 314 367 42
30 % 1929 2273 2
Entity #21 | Chains: H,h
Proteasome subunit alpha type-2 protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 43 494
95 % 22 51 554
90 % 22 51 580
70 % 22 51 612
50 % 25 55 593
40 % 314 366 43
30 % 1930 2273 2
Entity #22 | Chains: I,i
Proteasome subunit alpha type-4 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 43 496
95 % 22 51 559
90 % 22 51 585
70 % 22 51 619
50 % 312 364 38
40 % 314 366 44
30 % 1931 2273 2
Entity #23 | Chains: J,j
Proteasome subunit alpha type-7 protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 42 517
95 % 22 52 551
90 % 22 52 577
70 % 22 52 615
50 % 311 363 39
40 % 325 393 17
30 % 1932 2273 2
Entity #24 | Chains: K,k
Proteasome subunit alpha type-5 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 46 442
95 % 22 51 552
90 % 22 51 578
70 % 22 51 611
50 % 313 365 37
40 % 313 365 45
30 % 1933 2273 2
Entity #25 | Chains: L,l
Proteasome subunit alpha type-1 protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 42 525
95 % 22 52 547
90 % 22 52 586
70 % 22 52 622
50 % 22 52 647
40 % 22 52 684
30 % 22 52 713
Entity #26 | Chains: M,m
Proteasome subunit alpha type-3 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 44 422
95 % 23 52 453
90 % 23 52 487
70 % 23 52 522
50 % 59 97 313
40 % 61 99 314
30 % 1934 2273 2
Entity #27 | Chains: N,n
Proteasome subunit beta type-6 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 1873
95 % 1 17 2463
90 % 1 21 2138
70 % 1 21 2202
50 % 1 21 2248
40 % 1 21 2282
30 % 1 21 2290
Entity #28 | Chains: O,o
Proteasome subunit beta type-7 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 1874
95 % 1 17 2460
90 % 1 21 2139
70 % 1 21 2203
50 % 4 24 1821
40 % 4 24 1872
30 % 4 24 1895
Entity #29 | Chains: P,p
Proteasome subunit beta type-3 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 42 515
95 % 22 51 557
90 % 22 51 582
70 % 22 51 613
50 % 309 357 43
40 % 314 363 46
30 % 314 363 48
Entity #3 | Chains: W
26S proteasome non-ATPase regulatory subunit 12 protein, length: 456 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1803
95 % 1 32 2037
90 % 1 32 2086
70 % 1 32 2150
50 % 1 32 2190
40 % 6 56 1233
30 % 6 56 1276
Entity #30 | Chains: Q,q
Proteasome subunit beta type-2 protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 42 522
95 % 22 51 558
90 % 22 51 574
70 % 22 51 614
50 % 22 51 650
40 % 311 360 47
30 % 313 362 49
Entity #31 | Chains: R,r
Proteasome subunit beta type-5 protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 16 2087
95 % 1 16 2650
90 % 1 20 2282
70 % 1 20 2364
50 % 2 21 2207
40 % 2 21 2241
30 % 2 21 2250
Entity #32 | Chains: S,s
Proteasome subunit beta type-1 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 18 1716
95 % 2 18 2230
90 % 2 22 1956
70 % 2 22 2004
50 % 2 22 2048
40 % 289 328 77
30 % 289 328 81
Entity #33 | Chains: T,t
Proteasome subunit beta type-4 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 18 1735
95 % 2 18 2262
90 % 2 22 1995
70 % 2 22 2021
50 % 2 22 2077
40 % 2 22 2128
30 % 2 22 2150
Entity #4 | Chains: X
26S proteasome non-ATPase regulatory subunit 11 protein, length: 422 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1518
95 % 1 32 2001
90 % 1 32 2041
70 % 3 34 1984
50 % 3 34 1986
40 % 3 34 2052
30 % 3 34 2069
Entity #5 | Chains: Y
26S proteasome non-ATPase regulatory subunit 6 protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1748
95 % 1 32 1969
90 % 1 32 2013
70 % 1 32 2069
50 % 1 32 2115
40 % 1 32 2167
30 % 6 56 1267
Entity #6 | Chains: Z
26S proteasome non-ATPase regulatory subunit 7 protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 3355
95 % 1 21 3312
90 % 1 21 3387
70 % 1 21 3406
50 % 1 21 3351
40 % 7 40 1734
30 % 7 40 1760
Entity #7 | Chains: a
26S proteasome non-ATPase regulatory subunit 13 protein, length: 376 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 1931
95 % 1 32 1970
90 % 1 32 2014
70 % 1 32 2070
50 % 1 32 2116
40 % 1 32 2168
30 % 6 57 1247
Entity #8 | Chains: b
26S proteasome non-ATPase regulatory subunit 4 protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 3339
95 % 1 21 3284
90 % 1 21 3358
70 % 1 21 3370
50 % 1 21 3318
40 % 1 21 3305
30 % 1 21 3246
Entity #9 | Chains: c
26S proteasome non-ATPase regulatory subunit 14 protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1520
95 % 1 32 2013
90 % 1 32 2053
70 % 1 32 2118
50 % 6 57 1178
40 % 6 57 1215
30 % 6 57 1256

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5TOG 1 A Polyubiquitin-B 9606
2 5NVG 1 A Polyubiquitin-B 9606
3 5TOF 1 A Polyubiquitin-B 9606
4 4XOF 1 A Ubiquitin 9606
5 3A9J 1 A Ubiquitin 10090
6 3A9J 2 B Ubiquitin 10090
7 5GOB 1 A Ubiquitin 9606
8 5GOB 2 B D-ubiquitin 9606
9 5W46 1 A, B Polyubiquitin-B 9606
10 5GOD 1 A, B Ubiquitin 9606
11 5GOD 2 C, D D-ubiquitin 9606
12 5XVE 2 B Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9913
13 3NHE 2 B Ubiquitin 9606
14 5DK8 1 A, B Polyubiquitin-B Ubiquitin, UNP residues 2-75 9606
15 1YJ1 1 A, B, C Ubiquitin residues 1-76
16 5NL4 1 A, B, C Polyubiquitin-C 9606
17 5V1Y 2 C, D Ubiquitin 9606
18 4M0W 2 B Ubiquitin 9913
19 4Y1H 1 A Ubiquitin-40S ribosomal protein S27a K33 linked tri-Ubiquitin. 9913
20 2GBJ 1 A, B Ubiquitin 9606
21 1YIW 1 A, B, C Ubiquitin 9031
22 1OGW 1 A UBIQUITIN LEF IS (4S)-5-FLUORO-L-LEUCINE RESIDUES 1-76 9606
23 2WWZ 1 A, B UBIQUITIN 9913
24 5KYC 2 C Polyubiquitin-B UNP residues 1-76 9606
25 4IUM 2 B Ubiquitin UNP residues 1-75 9606
26 4GU2 1 A Ubiquitin 5759
27 3A9K 1 A Ubiquitin 10090
28 3A9K 2 B Ubiquitin 10090
29 4HK2 1 A, B, C, D Ubiquitin 9606
30 5KYF 2 C Polyubiquitin-B UNP residues 1-76 9606
31 1XD3 2 B, D UBC protein 9606
32 5NLF 1 A, B, C Polyubiquitin-C 9606
33 4ZPZ 1 A, B Polyubiquitin-B ubiquitin, UNP residues 1-73 9606
34 6E2B 1 A, C, E, G, I, P Ubiquitin 9913
35 4UN2 1 A UBIQUITIN 9606
36 5VBT 1 A, B UBH04 32630
37 6FFA 2 B Ubiquitin-like protein ISG15 9606
38 4PIH 1 A, B Ubiquitin 9606
39 2ZCC 1 A, B, C Ubiquitin 9913
40 6NYO 2 E Ubiquitin 4896
41 4PIJ 1 A, B Ubiquitin 9606
42 5NLI 1 A, B, C Polyubiquitin-C 9606
43 3PHX 2 B Ubiquitin-like protein ISG15 UNP residues 79-156 9606
44 5O6T 2 C, D Polyubiquitin-B A variant of ubiquitin identified from a phage-display library 9606
45 5YT6 1 A, C, E, G Ubiquitin 9606
46 4V3L 2 B, D POLYUBIQUITIN-C G76 IN CHAIN B IS COVALENTLY LINKED TO K85 SIDE CHAIN IN CHAIN A. RESIDUES 77-152 9606
47 4LJO 2 B Polyubiquitin-C unp residues 77-152 9913
48 4FBJ 2 B NEDD8 9606
49 3BY4 2 B Ubiquitin 9606
50 6FDK 2 B Polyubiquitin-B 9606
51 5K9P 1 A Polyubiquitin-B 9606
52 5NLJ 1 A, B, C Polyubiquitin-B 9606
53 5KYD 1 D Polyubiquitin-B UNP residues 1-76 9606
54 4XYZ 1 A, B Polyubiquitin-C UNP residues 77-152 9913
55 3M3J 1 A, B, C, D, E, F Ubiquitin 9913
56 2ZNV 2 B, E Ubiquitin 10090
57 2ZNV 3 C, F Ubiquitin 10090
58 2GBM 1 A, B, C, D Ubiquitin 9606
59 5OXH 1 A Ubiquitin T66V/L67N mutant 9606
60 5EMZ 1 A, C, E Polyubiquitin-B 9606
61 5EMZ 2 B, D, F Polyubiquitin-B 9606
62 6B7M 2 B, C Polyubiquitin-C 9606
63 6HEI 2 B Polyubiquitin-B 9606
64 3VUX 1 A, B, C Polyubiquitin-C Ubiquitin 9606
65 2GBN 1 A Ubiquitin 9606
66 2ZCB 1 A, B, C Ubiquitin 9606
67 5OXI 1 A, B Ubiquitin L67S mutant 9606
68 4K1R 2 B, D Polyubiquitin-C 9606
69 6HPR 2 B, D Polyubiquitin-B Ubiquitin residues 1-76 contains N-terminal GSGGS after TEV cleavage. Chain D Gly76 forms isopeptide linkage with Chain C Lys85. 9606
70 3PRP 2 B, D Ubiquitin 9606 3.4.19.12 | Details
71 4I6N 2 B, D Ubiquitin 9606
72 2ZEQ 1 A E3 ubiquitin-protein ligase parkin Ubiquitin-like domain 10090 2.3.2.31 | Details
73 3V6C 2 B Ubiquitin 9606
74 5AF5 1 A POLYUBIQUITIN-C 9606
75 5J8P 1 A ubiquitin 9606
76 5J8P 2 B D-ubiquitin 9606
77 1NDD 1 A, B, C, D PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8) HUMAN NEDD8 UBIQUITIN-LIKE PROTEIN MONOMER WITH 4 MOLECULES IN THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT 9606
78 4K7U 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
79 6EI1 2 B Polyubiquitin-B 9606
80 6FGE 2 C Polyubiquitin-B 9606
81 2J7Q 2 B, D UBIQUITIN THE C-TERMINAL GLY 76 IS REPLACED BY THE VINYLMETHYLESTER MOIETY UBIQUITIN FUSED TO VINYLMETHYLESTER, UBVME, RESIDUES 1-75 9606
82 3NS8 1 A, B Ubiquitin 9606
83 5GOJ 1 A Ubiquitin 9606
84 5GOJ 2 B D-ubiquitin 9606
85 6OI4 2 C, D ubiquitin 9606
86 1UBI 1 A UBIQUITIN 9606
87 2D3G 1 A, B ubiquitin 9913
88 5GOC 1 A Ubiquitin 9606
89 5GOC 2 D D-ubiquitin 9606
90 5X3N 1 A Polyubiquitin-B UNP residues 1-76 9606
91 5XIU 2 B Ubiquitin-40S ribosomal protein S27a 10090
92 5TXK 2 B Polyubiquitin-B 9606
93 5WFI 2 C, D Ubiquitin 9606
94 1UBQ 1 A UBIQUITIN 9606
95 6B7O 2 B, C Polyubiquitin-C 9606
96 4ZFR 2 B ubiquitin unp residues 77-152 9606
97 4MSM 2 B, D Ubiquitin UNP residues 77-152 9606
98 4HJK 1 A Ubiquitin UNP residues 87-162 9606
99 6GLC 2 B Polyubiquitin-B 9606
100 3N32 1 A Ubiquitin 9606
101 5L8H 2 B Polyubiquitin-B Recombinant expression followed by chemical synthesis. 9606
102 3ONS 1 A Ubiquitin 9606
103 5XU8 2 B Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9913
104 3MHS 4 D Ubiquitin 9606
105 5M93 1 A, B, C Polyubiquitin-B 9606
106 4K7W 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
107 2HD5 2 B Polyubiquitin residues 1-76 9913
108 5NMC 1 A, B, C Polyubiquitin-C 9606
109 5GOI 1 A, B Ubiquitin 9606
110 5GOI 2 C, D D-ubiquitin 9606
111 1WRD 2 B Ubiquitin 9913
112 5GVI 2 B ubiquitin 10090
113 5GVI 3 C ubiquitin 10090
114 4K7S 1 A, B, C ubiquitin UNP residues 1-73 9606 6.3.2.19 | Details
115 2BKR 2 B NEDDYLIN 9606
116 3B1L 1 X E3 ubiquitin-protein ligase parkin Ubiquitin-like domain 10090 2.3.2.31 | Details
117 5CVM 2 B Polyubiquitin-B UNP residues 1-76 9606
118 2FCS 1 A, B Ubiquitin residues 1-76
119 4Q5E 2 B Polyubiquitin 4932 6.3.2.19 | Details
120 5V1Z 2 C, D Ubiquitin 9606
121 3ALB 1 A, B, C, D ubiquitin 9606
122 6GZS 2 B Polyubiquitin-B 9606
123 5D0M 3 B Polyubiquitin-B UNP residues 1-76 9606
124 5XIS 2 B, E Ubiquitin-40S ribosomal protein S27a 10090
125 5XIS 3 C, F Ubiquitin-40S ribosomal protein S27a 10090
126 4PIG 1 A, B, C, D Ubiquitin 9606
127 5X3M 1 A Polyubiquitin-B 9606
128 5X3M 2 D D-ubiquitin D-Ub-S65E-NH2 9606
129 5NL5 1 A, B, C Polyubiquitin-B 9606
130 6ML1 2 C, E Ubiquitin variant 15.1a This is a Ubv (ubiquitin variant) selected by phage display to bindthe USP15 USP domain with high affinity 9606
131 4MSQ 2 B, D Ubiquitin UNP residues 77-152 9606
132 4LDT 2 B Ubiquitin aldehyde 9606
133 4LDT 4 D Ubiquitin 9606
134 3VUW 1 A, B, C Polyubiquitin-C Ubiquitin 9606
135 3TMP 2 B, D, F, H Polyubiquitin-C Ubiquitin-like 1 9606
136 2QHO 1 A, C, E, G Ubiquitin 9913
137 3H7P 1 A Ubiquitin 9606
138 3H7P 2 B Ubiquitin 9606
139 4WZP 1 A, B, C, D, E, F, G, H ubiquitin phosphorylation at Ser65 UNP residues 1-76 9606
140 3EHV 1 A, B, C Ubiquitin 9606 6.3.2.19 | Details
141 5GO7 1 A Ubiquitin 9606
142 5GO7 2 B D-ubiquitin 9606
143 6CPM 2 E, F Ubiquitin variant 15.1d This is a Ubv (ubiquitin variant) selected by phage display to bind the USP15 USP domain with high affinity 9606
144 1P3Q 2 U, V Ubiquitin 9913
145 2OOB 2 B Ubiquitin 9913
146 5ULF 2 B, D Ubiquitin 9606
147 5KYE 2 C, D Polyubiquitin-B UNP residues 1-76 9606
148 6ISU 2 B Ubiquitin 9606
149 6ISU 3 C Ubiquitin 9606
150 4F8C 2 B, D NEDD8 9606
151 5ULH 2 B Ubiquitin 9606
152 3HM3 1 A, B, C, D Ubiquitin 9606
153 5LRW 2 B, D Polyubiquitin-B Gly76 was replaced with 2-bromoethylamine 9606
154 5GOK 1 A Ubiquitin 9606
155 5GOK 2 B D-ubiquitin 9606
156 4WLR 3 C Polyubiquitin-B 9606
157 3WWQ 1 A, D, G, J Ubiquitin 10090
158 3WWQ 2 B, E, H, K Ubiquitin 10090
159 5JG6 2 B, C Polyubiquitin-B 9606
160 3EFU 1 A Ubiquitin 9606
161 4Q5H 2 B Polyubiquitin 4932 6.3.2.19 | Details
162 5AF4 1 A, B, C, D, E, F, G, H UBIQUITIN ISOPEPTIDE LINKAGES BETWEEN A76 C AND B33 NZ, C76 C AND D33 NZ, E76 C AND F33 NZ 9606
163 4V3K 2 B, E POLYUBIQUITIN-C LYS85 IN CHAINS A AND D IS COVALENTLY LINKED TO GLY76 IN CHAINS B AND E, RESPECTIVELY. RESIDUES 77-152 9606
164 4IG7 2 B Ubiquitin 9606
165 2JF5 1 A, B UBIQUITIN ISO-PEPTIDE LINK BETWEEN A-LYS63 AND B-GLY76 9606
166 5MN9 1 A, B Ubiquitin-40S ribosomal protein S27a 9913
167 5WVO 1 A, B Ubiquitin 9606
168 3V6E 2 B Ubiquitin 9606
169 1UZX 2 B UBIQUITIN 9913
170 5YDR 1 A, D Polyubiquitin-B UNP residues 1-73 9606
171 1S1Q 2 B, D ubiquitin 9606
172 6NYA 2 B, E Ubiquitin residues 77-152 4565
173 4LJP 2 B Polyubiquitin-C unp residues 77-152 9913
174 3VUY 1 A, B, C Polyubiquitin-C Ubiquitin 9606
175 3PHW 2 B, D, F, H Ubiquitin-40S ribosomal protein S27a UNP residues 1-75 9606
176 4PQT 2 B Protein UBBP4 unp residues 77-152 9606
177 5BZ0 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin from bovine erythrocytes 9913
178 2GBR 1 A, B, C Ubiquitin 9606
179 2FAZ 1 A, B Ubiquitin-like containing PHD and RING finger domains protein 1 UBIQUITIN-LIKE DOMAIN 9606 2.3.2.27 | Details
180 4XKL 1 A, C Ubiquitin 9606
181 4FJV 2 B, D Polyubiquitin-C 9606
182 5DFL 1 B Ubiquitin 9606
183 2C7N 2 B, D, F, H, J, L UBIQUITIN 9913
184 5HPS 2 B Ubiquitin variant P1.1 9606
185 5GOH 1 A Ubiquitin 9606
186 5GOH 2 D D-ubiquitin 9606
187 3ZNI 4 D, H, L, P POLYUBIQUITIN-C CARBONYL CARBON OF G76 IN CHIANS D, H, L AND P FORMS AN ISOPEPTIDE LINKAGE WITH THE SIDECHAIN OF K85 IN CHAINS C, G, K AND O, RESPECTIVELY. GSGGS LINKER AT THE N- TERMINUS OF PROTEIN RESULTED FROM CLONING RESIDUES 77-152 9606
188 2G45 2 B, E Ubiquitin 9606
189 6AQR 4 D Polyubiquitin-C 9606
190 5MNJ 2 B, F Polyubiquitin-B gsggs linker at the N-terminus resulted from cloning. G76 in chain B is covalently linked to K85 side chain in Chain A. 9606
191 5ZQ3 2 C, D Ubiquitin 9606
192 5ZQ4 2 C, D ubiquitin 9606
193 4GSW 1 A, B Ubiquitin 5759
194 4RF1 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
195 1SIF 1 A ubiquitin 9606
196 5JBY 1 A, C, E ubiquitin 9606
197 5JBY 2 B, D, F D-ubiquitin 9606
198 5IFR 2 B Polyubiquitin-B 9606
199 2IBI 2 B Ubiquitin 9606
200 5L6H 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
201 6D4P 2 C Ubiquitin Variant Ubv.D1.1 9606
202 6JB7 1 B Ubiquitin 9606
203 5GOG 1 A Ubiquitin 9606
204 5GOG 2 B D-ubiquitin 9606
205 2GBK 1 A, B, C, D Ubiquitin 9606
206 4AUQ 3 C, F POLYUBIQUITIN-C UBIQUITIN, RESIDUES 1-76 9606
207 4NNJ 2 B, D, E Uba1 UNP residues 1-76 4932
208 4Z9S 1 A, B, C, D Ubiquitin-40S ribosomal protein S27a UNP RESIDUES 1-76 9913
209 6DGF 2 B Polyubiquitin-B 9606
210 2XEW 1 A, B, C, D, E, F, G, H, I, J, K, L UBIQUITIN UBIQUITIN POLYMER LINKED THROUGH LYS11 IN AN ISOPEPTIDE LINKAGE 9606
211 2WDT 2 B, D UBIQUITIN C-TERMINAL GLY76 OF WILDTYPE UBIQUITIN IS REPLACED BY A VINYL METHYLESTER MOIETY (UBVME) RESIDUES 1-75 9606
212 1XT9 2 B Neddylin 9606
213 1AAR 1 A, B DI-UBIQUITIN 9913
214 4AP4 3 C, F UBIQUITIN C ISOPEPTIDE AMIDE LINKED TO UBCH5A (CHAIN B AND CHAIN E) RESIDUES 76-152 9606
215 4UEL 2 B POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH-L5 9606
216 4II2 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 4896
217 6OQ1 1 A, B Ubiquitin 9606
218 6OQ1 2 C, D Ubiquitin 9606
219 6OQ1 3 E, F Ubiquitin 9606
220 6RYA 2 B, D, F Polyubiquitin-C 9606
221 4ZFT 2 B, D Polyubiquitin-B unp residues 77-152 9606
222 2WX0 1 A, B, E, F UBIQUITIN 9913
223 3A1Q 1 A, D Ubiquitin 10090
224 3A1Q 2 B, E Ubiquitin 10090
225 5HPL 2 C, D Ubiquitin variant R5.4 9606
226 5TR4 2 B, D Ubiquitin 9913
227 4BOS 2 C, E POLYUBIQUITIN-C RESIDUES 1-76 9606
228 3H7S 1 A, B Ubiquitin 9606
229 3C0R 2 B, D Ubiquitin 9606
230 5AIU 3 C, F POLYUBIQUITIN-C CHAIN B COVALENTLY LINKED TO CHAINS C, CHAIN E IS COVALENTLY LINKED TO CHAIN F UNP RESIDUES 1-76 9606
231 6PGV 2 B Polyubiquitin-B 9606
232 4S22 1 A, B, C, D Ubiquitin residues 77-152 9913
233 2C7M 2 B UBIQUITIN 9913
234 1TBE 1 A, B TETRAUBIQUITIN 9606
235 3PT2 2 B Ubiquitin B 9606
236 5VZW 2 C, D Ubiquitin 9606
237 5JZE 1 B, D Ubiquitin-like protein ISG15 C-terminal 10090
238 3PRM 2 B, D Ubiquitin 9606 3.4.19.12 | Details
239 4R62 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin 9606
240 5EYA 3 C, D Polyubiquitin-B UNP residues 1-76 9606
241 5GO8 1 A ubiquitin 9606
242 5GO8 2 B D-ubiquitin 9606
243 3A33 2 B Ubiquitin 9606
244 3VHT 3 C Ubiquitin 10090
245 5XIT 1 D, F Ubiquitin-40S ribosomal protein S27a 10090
246 5XIT 3 B, H Ubiquitin-40S ribosomal protein S27a 10090
247 6ASR 1 A, C Ubiquitin residues 1-76 9606
248 2FCN 1 A, B Ubiquitin residues 1-76
249 4DHJ 2 B, F, J, M Ubiquitin aldehyde 9606
250 4DHJ 3 D, H Ubiquitin 9606
251 3ZNH 2 B POLYUBIQUITIN-B GLY76 IS REPLACED WITH A PROPARGYL GROUP 9606
252 4BBN 2 C POLYUBIQUITIN-B RESIDUES 1-76 9913
253 4BBN 3 F POLYUBIQUITIN-B RESIDUES 229-304 9913
254 4NQL 2 B Ubiquitin 10090
255 4NQL 3 C Ubiquitin 10090
256 6NJG 2 C Polyubiquitin-B 9606
257 1NBF 2 C, D Ubiquitin aldehyde 9606
258 2O6V 1 A, C, E, G Ubiquitin 9606
259 2O6V 2 B, F Ubiquitin 9606
260 2O6V 3 D, H Ubiquitin 9606
261 3OFI 2 C, D Ubiquitin 9606
262 5TL7 1 A, C Ubiquitin-like protein ISG15 C-terminal domain (UNP residues 78-155 10090
263 3AUL 1 A, B Polyubiquitin-C Ubiquitin 9606
264 3UGB 2 B Polyubiquitin-C unp residues 1-76 9606
265 5JBV 1 A Ubiquitin 9606
266 5JBV 2 B D-ubiquitin 9606
267 5X3O 1 A Polyubiquitin-B UNP residues 1-76 9606
268 5X3O 2 D D-ubiquitin 9606
269 5ULK 2 B Ubiquitin 9606
270 5ZQ5 2 B, D Ubiquitin 9606
271 6FX4 2 B, D Polyubiquitin-B 9606
272 3NOB 1 A, B, C, D, E, F, G, H Ubiquitin 9606
273 6CRN 2 E, F, G, H Ubiquitin variant 15.2 This is a Ubv (ubiquitin variant) selected by phage display to bind the USP15 USP domain with high affinity 9606
274 6D68 2 C, D Ubv.G1.1 9606
275 6QK9 1 A, B, C, D, E, F, G, H, I, J, K, L Polyubiquitin-B 9606
276 3IFW 2 B Ubiquitin 9606
277 3N3K 2 B Ubiquitin 9606
278 6A6I 2 B, D Polyubiquitin-B UNP residues 1-76 9606
279 6A6I 3 F, H Polyubiquitin-B UNP residues 1-77 9606
280 5W8U 2 B, D Ubiquitin-like protein ISG15 UNP residues 80-156 9606
281 2FCM 1 A, B Ubiquitin residues 1-76
282 4KSK 2 C, D Polyubiquitin-C unp residues 76-152 9606
283 5L6J 2 B, D Ubiquitin-40S ribosomal protein S31 4932
284 5HPK 2 B Ubiquitin variant NL.1 9606
285 5OHL 2 I, J, K, L, M, N, O, P Polyubiquitin-B 9606
286 3I3T 2 B, D, F, H Ubiquitin 9606
287 5FER 3 C, F Ubiquitin-40S ribosomal protein S27a 9913
288 5IBK 3 C, F Polyubiquitin-B UNP residues 75-150 9606
289 5OHK 2 B Polyubiquitin-B 9606
290 1CMX 2 B, D PROTEIN (UBIQUITIN YUH1-UBAL) UBIQUITIN C-TERMINUS MODIFIED TO AN ALDEHYDE ALL 9606 3.1.2.15 | Details
291 3OJ3 1 A, B, C, D, E, F, G, H Ubiquitin Ubiquitin, UNP residues 1-76 9606
292 5N38 2 B Polyubiquitin-B Ser65 is phosphorylated 9606
293 4HCP 2 B NEDD8 unp residues 1-76 9606
294 3O65 2 B, D, F, H Ubiquitin 9606
295 5CRA 2 C, D Polyubiquitin-B UNP residues 1-75 9606
296 6IF1 2 C, D Ubiquitin 9606
297 5TL6 2 A, C Ubiquitin-like protein ISG15 C-terminal domain (UNP residues 80-157) 9606
298 5U4P 3 C Ubiquitin-40S ribosomal protein S31 4932
299 5L6I 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
300 6O82 2 B, D Ubiquitin-60S ribosomal protein L40 residues 1-76 4896
301 5XPK 1 A Ubiquitin 9606
302 5XPK 2 B D-ubiquitin 9606
303 5XDP 1 B D-ubiquitin 9606
304 5XDP 2 A ubiquitin-B K11/48-branched teraubiquitin 9606
305 5O76 3 E, F UbV.pCBL ubiquitin variant 9606
306 5D0K 3 B, E, H, K Polyubiquitin-B UNP residues 1-76 9606
307 5OHV 1 A, C Ubiquitin 9606
308 5KNL 2 B, E Ubiquitin 84753
309 4I6L 2 B Ubiquitin UNP residues 77-150 9606
310 5TUT 2 B Ubiquitin 9606
311 3OLM 2 D Ubiquitin 4932
312 3CMM 2 B, D Ubiquitin 559292
313 4MDK 2 E, F, G, H Ubiquitin UNP residues 76-152 9606
314 5W8T 1 B, D Ubiquitin-like protein ISG15 9606
315 5N2W 2 B Polyubiquitin-B Ser65 is phosphorylated to give SEP65 9606
316 4MM3 1 A Ubiquitin UNP residues 1-76 9606
317 2FIF 1 A, C, E Ubiquitin 9913
318 5JQS 2 D Ubiquitin-40S ribosomal protein S27a 9913
319 5YDK 2 B, E, H, K Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9606
320 5YDK 3 C, D, I, J Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9606
321 2XBB 2 C, D UBIQUITIN 9913
322 2GMI 3 C Ubiquitin 9606
323 4HCN 2 B Polyubiquitin unp RESIDUES 1-76 4932
324 5J26 1 B Ubiquitin Variant i53 9606
325 3DVG 3 X Ubiquitin D77 9606
326 3DVG 4 Y Ubiquitin 9606
327 1WR6 2 E, F, G, H ubiquitin 9913
328 3LDZ 1 E, F, G Ubiquitin 9913
329 3PTF 2 C, D Polyubiquitin-B Ubiquitin 9606
330 6BVA 3 A, B Polyubiquitin-B 9606
331 5ZQ7 2 B, D Ubiquitin 9606
332 3RUL 1 A, B, C, D Ubiquitin 9606
333 5BNB 2 E, F, G, I Polyubiquitin-B 9606
334 5LRX 2 B, D Polyubiquitin-B Gly76 was replaced with propargylamide 9606
335 5CAW 2 B, D Polyubiquitin-B phosphorylated at Ser65 Gly76 exchanged with chemical probe, bromopropylamine. The bromide was lost during the coupling. 9606
336 4XOK 1 A, B, C Ubiquitin 9606
337 3MTN 2 B, D UBIQUITIN VARIANT UBV.21.4 9606
338 5ZQ6 2 B, D Ubiquitin 9606
339 5LRV 2 B Polyubiquitin-B Lys11 was replaced with a diaminobutyric acid (DAB) residue 9606
340 5LRV 3 C Polyubiquitin-B Gly76 was replaced with a ligation handle for diubiquitin probe generation 9606
341 6S53 2 D, F, J, L Polyubiquitin-C 9606
342 3DVN 3 U, X Ubiquitin D77 9606
343 3DVN 4 V, Y Ubiquitin 9606
344 5L8W 3 C Polyubiquitin-B Recombinant expression followed by chemical synthesis 9606
345 1F9J 1 A, B TETRAUBIQUITIN 9606
346 6BYH 3 C, D, H Polyubiquitin-B 9606
347 2FID 1 A Ubiquitin 9913
348 5OHP 2 B, C Polyubiquitin-B 9606
349 4HXD 1 A, C Polyubiquitin-C 9606 3.4.19.12 | Details
350 1YD8 1 U, V UBIQUIN 9913
351 4BOZ 2 B, C, E UBIQUITIN-C 9606
352 5HPT 2 B, E, H Ubiquitin variant P2.3 9606
353 3WXG 2 B, E Ubiquitin 10090
354 3WXG 3 C, F Ubiquitin UNP residues 1-72 10090
355 6CP2 3 C Polyubiquitin-B 9606
356 4XKH 1 A, B, D, F, G, I Polyubiquitin-C UNP RESIDUES 77-152 9913
357 3IHP 2 C, D Ubiquitin 9606
358 6D6I 3 C, F Ubv.V1.1 9606
359 5LN1 2 U Polyubiquitin-B 9606
360 3K9P 2 B Ubiquitin 9606
361 3DBH 3 I, J, K, L NEDD8 9606
362 4BVU 3 C UBIQUITIN OXYESTER LINK BETWEEN G76 AND UBCH5C S85 9606
363 6JB6 1 B Ubiquitin 9606
364 5CVN 3 D Polyubiquitin-B UNP residues 1-76 9606
365 3JSV 1 A Ubiquitin 9606
366 3JSV 2 B Ubiquitin 9606
367 3DBL 3 I, J, K, L NEDD8 9606
368 3TBL 2 D, E Ubiquitin 9606
369 2HTH 1 A Ubiquitin 9606
370 3KW5 2 B Ubiquitin 9606
371 6EQI 1 A Ubiquitin 9606
372 5E6J 2 B, E ubiquitin 32630
373 5E6J 3 C, F Polyubiquitin-B 32630
374 2NVU 4 I, J NEDD8 9606
375 2XK5 1 A UBIQUITIN 9606
376 2XK5 2 B UBIQUITIN 9606
377 4JQW 2 C Polyubiquitin-C Ubiquitin 9606
378 4RF0 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
379 3KVF 2 B Ubiquitin 9606
380 6FYH 2 B Polyubiquitin-B 9606
381 6O83 2 B, D Ubiquitin-60S ribosomal protein L40 residues 1-75 4896
382 5AF6 1 A, B, C, D, E UBIQUITIN ISOPEPTIDE BONDS ACROSS BETWEEN CHAINS, A76 C AND D33 NZ, B76 C AND A33 NZ, C76C AND B33 NZ, E76 C AND C33 NZ. ISOPEPTIDE BOND ACROSS THE ASU FOR, D76 C AND E33 NZ SYMM 9606
383 3H1U 1 A, B Ubiquitin 9913
384 6HEK 2 B, D Polyubiquitin-B 9606
385 5JTJ 2 B Polyubiquitin-B 9606
386 2WX1 1 A, B UBIQUITIN 9913
387 4WUR 2 B Polyubiquitin-B UNP residues 1-76 9606
388 4II3 2 B, D Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 4896
389 5C7J 2 C, D Polyubiquitin-C UNP residues 1-74 9606
390 4S1Z 1 A, B, C, D, E Ubiquitin residues 1-76 9606
391 6DC6 2 B, D Ubiquitin 9606
392 4XOL 1 A, B Ubiquitin 9606
393 5JP3 2 B, D, F, H Polyubiquitin-B 9606
394 4P4H 3 S, T, U, W, X Ubiquitin-60S ribosomal protein L40 9606
395 3GZN 3 I, J NEDD8 9606
396 5O44 1 A, E Ubiquitin 7370
397 5O44 2 B, C Polyubiquitin-B 9606
398 5O44 3 D, F Polyubiquitin-B 9606
399 3PHD 2 E, F, G, H Polyubiquitin 9606
400 3DBR 3 I, J, K, L NEDD8 9606
401 5YIK 2 C, D, F ubiquitin UNP RESIDUES 1-76 9606
402 5ZBU 3 E Ubiquitin 9606
403 3N30 1 A, B Ubiquitin 9606
404 4P5O 5 H, K NEDD8 9606
405 3ZLZ 1 A, B UBIQUITIN TRI-UBIQUITIN CHAIN LINKED VIA LYS6. K48R IN BOTH MOLECULES. ISOPEPTIDE LINKAGES ARE NOT RESOLVED. 9606
406 3JVZ 3 X, Y Ubiquitin 9606
407 4DHZ 2 B Ubiquitin aldehyde 9606
408 4DHZ 3 E Ubiquitin 9606
409 5YIJ 2 C, D, G Ubiquitin UNP RESIDUES 1-76 9606
410 3DQV 1 A, B NEDD8 NEDD8 C-terminus covalently linked to Cul5 Lys724 9606
411 5UDH 3 E Ubiquitin C variant Hexa-his N-terminal tagged protein UNP residues 17-92 9606
412 5AIT 3 C, F POLYUBIQUITIN-C UNP RESIDUES 1-76 9913
413 5O6S 1 A, B, C, D, E, F Polyubiquitin-B Variant of ubiquitin identified from phage-display 9606
414 3VFK 1 A ubiquitin, C-terminal fused by Cys-Lys-D-Ala-D-Ala 9606
415 5C7M 2 B, C Polyubiquitin-C UNP residues 1-75 9606
416 1R4M 3 I, J, K, L Ubiquitin-like protein NEDD8 9606
417 3JW0 3 X, Y Ubiquitin 9606
418 4LCD 3 E, F Ubiquitin UNP residues 1-75 9606
419 6DJ9 2 G, H, I, J, K, L Ubiquitin Variant UbV 15.D The following is a variant of ubiquitin selected by phage display to bind to the USP15 N-terminus 9606
420 4DDG 2 D, E, F, G, H, I, M, N, O, P, Q, R Polyubiquitin-C 9606
421 5JTV 2 B, D, F, H Polyubiquitin-B 9606
422 5OHN 2 B, D Polyubiquitin-B 9606
423 5TTE 3 F ubiquitin unp residues 1-76 4565
424 2FCQ 1 A, B Ubiquitin residues 1-76 9031
425 3EEC 1 A, B Ubiquitin 9606
426 5VNZ 3 C, F Ubiquitin 9606
427 6H4H 2 C, D Polyubiquitin-B 9606
428 4NQK 2 E, F, G, H, I, J Ubiquitin UNP residues 76-152 9606
429 6C16 3 D, H Polyubiquitin-B 9606
430 4DDI 2 D, E, F, G, H, I Polyubiquitin-C 9606
431 5H7S 1 E, F Ubiquitin-like 1 9606
432 5EDV 3 E, F, G, H Polyubiquitin-B UNP residues 1-76 9606
433 5CVO 3 C, F Polyubiquitin-B UNP residues 1-76 9606
434 4UF6 2 B, E, H, K POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH- L5 9606
435 5OHM 1 A, C, E, G, I, K Polyubiquitin-C 9606
436 4ZUX 10 X, c, h, m Polyubiquitin-B 9606
437 2DX5 2 B Ubiquitin 9913
438 3OJ4 2 B, E Ubiquitin Ubiquitin, UNP residues 1-76 9606
439 1R4N 3 I, J, K, L Ubiquitin-like protein NEDD8 9606
440 5VO0 3 C, F Ubiquitin 9606
441 6DJW 2 B Ubiquitin 9913
442 2AYO 2 B Ubiquitin 9606
443 5KHY 1 A Polyubiquitin-B 9606
444 5KHY 2 B Polyubiquitin-B 9606
445 6DJX 2 B Ubiquitin 9913
446 4JIO 2 U Ubiquitin 9606
447 4WHV 3 A, F, G, L Polyubiquitin-B unp residues 1-76 9606
448 6KOW 1 A Polyubiquitin-B 9606
449 6KOX 1 A Polyubiquitin-B 9606
450 6KIU 11 O Ubiquitin 9606
451 6KIV 9 O Ubiquitin 9606
452 6KIW 9 O Ubiquitin 9606
453 6K4I 1 A ubiquitin 9606
454 6OQ2 1 B Ubiquitin 9606
455 6OQ2 2 D Ubiquitin 9606
456 6OQ2 3 E Ubiquitin 9606
457 6R7F 14 N NEDD8 9606
458 6R7I 9 N NEDD8 9606
459 6OB1 1 A Ubiquitin 9606
460 6OB1 2 B Ubiquitin 9606
461 6OA9 2 H, J, K Ubiquitin 4932
462 6OAA 3 H Ubiquitin 4932
463 6O96 8 L Polyubiquitin-B 9606
464 6JMA 7 Y Ubiquitin 9606
465 6J99 7 L Ubiquitin 9606
466 6NQA 7 L Ubiquitin 9606
467 6NOG 5 L Ubiquitin 9606
468 6NN6 8 L Ubiquitin 9606
469 6QF8 1 A Polyubiquitin-B 9606
470 6NJ9 5 L Ubiquitin 9606
471 6N13 2 D ubiquitin 9606
472 6N13 4 A phosphoubiquitin 9606
473 6MSB 19 u, w Ubiquitin 9606
474 6MSD 19 u, w Ubiquitin 9606
475 6MSE 19 u Ubiquitin 9606
476 6MSG 19 u Ubiquitin 9606
477 6FTX 8 N, O Polyubiquitin-B 9606
478 5ZD0 1 A ubiquitin 9606
479 5YMY 1 A Ubiquitin 9606
480 5YMY 2 B Ubiquitin 9606
481 5VZM 1 A Ubiquitin UNP residues 1-76 9606
482 5XK4 1 A Polyubiquitin-B UNP residues 1-76 9606
483 5XK5 1 A Polyubiquitin-B UNP residues 1-76 9606
484 5VEY 2 B Polyubiquitin-B 9606
485 5VF0 1 A Polyubiquitin-B 9606
486 5XBO 1 A Polyubiquitin-B UNP residues 1-76 9606
487 5N9V 1 A NAD(P)(+)--arginine ADP-ribosyltransferase 5911 2.4.2.31 | Details
488 5UJL 1 A, B Ubiquitin residues 1-76 9606
489 5UJN 1 A, B Ubiquitin 9606
490 5TR5 1 A E3 ubiquitin-protein ligase parkin residues 1-76 9606 2.3.2.31 | Details
491 5GO0 1 A Ubiquitin, putative 5691
492 5GJQ 34 y Polyubiquitin-B UNP RESIDUES 1-76 9606
493 5KGF 8 M, O Ubiquitin 9606
494 2NBD 1 A entity 9606
495 2NBE 1 A entity 9606
496 2N7K 1 A NEDD8 9606
497 5A5B 9 9 UBIQUITIN ALDEHYDE 9606
498 2N3U 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
499 2N3V 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
500 2N3W 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
501 2N2K 1 A ubiquitin 9606
502 2N2K 2 B ubiquitin 9606
503 2N13 2 B Ubiquitin 9606
504 2N13 3 C Ubiquitin 9606
505 2MWS 1 A Ubiquitin UNP residues 1-76 9606
506 2MUR 2 B Ubiquitin 9606
507 2MSG 1 A Ubiquitin UNP residuse 1-72 9606
508 2MRO 1 A Polyubiquitin-B Human Ubiquitin 9606
509 2MRE 1 A Polyubiquitin-C unp residues 1-76 9606
510 2MOR 1 A Ubiquitin UNP residues 1-76 9606
511 2MJB 1 A Ubiquitin-60S ribosomal protein L40 Ubiquitin-like 3 domain 9606
512 2MJ5 1 A Polyubiquitin-C UNP residuses 1-76 9606
513 2MI8 1 A Ubiquitin 9606
514 2RU6 1 A Ubiquitin 9606
515 2MCN 2 B Ubiquitin UNP residues 1-76 9606
516 2MBQ 1 A, B Ubiquitin UNP residues 1-76 9606
517 2MBO 1 A, B Ubiquitin UNP residues 1-76 9606
518 2MBH 2 A Ubiquitin 9606
519 2MBB 2 B Polyubiquitin-B UNP P0CG47 residues 1-76 9606
520 2M0X 1 A engineered ubiquitin variant 9606
521 2LZ6 1 A Ubiquitin 9606
522 2LVO 1 A Ubiquitin 9606
523 2LVP 1 A, B Ubiquitin 9606
524 2LVQ 1 A, B Ubiquitin 9606
525 2RSU 1 A Ubiquitin 9606
526 2LRW 1 A Ubiquitin, putative 185431
527 2LJ5 1 A Ubiquitin 9606
528 2LD9 1 A Ubiquitin 9606
529 2L3Z 1 A Ubiquitin UNP Residues 1-76 9606
530 2L0T 1 A Ubiquitin 9606
531 2L0F 1 A Ubiquitin 9606
532 2L00 2 B Ubiquitin ubiquitin core domain 4932
533 2RR9 1 A, B ubiquitin 9606
534 2KWV 2 B Ubiquitin 9606
535 2KWU 2 B Ubiquitin 9606
536 2KTF 1 A Ubiquitin 9606
537 2KOX 1 A Ubiquitin 9606
538 2KO3 1 A NEDD8 9606
539 2KNB 1 A E3 ubiquitin-protein ligase parkin 10116 2.3.2.31 | Details
540 2KN5 1 A Ubiquitin 9606
541 2KLG 1 A Ubiquitin 9606
542 2KJH 2 B Ubiquitin 9606
543 2KHW 2 B Ubiquitin 9606
544 2KDE 2 B, C Ubiquitin 8355
545 2KDF 2 B, C Ubiquitin 9606
546 2K8B 1 A Ubiquitin 9606
547 2K8C 1 A Ubiquitin 9606
548 2K6D 2 B Ubiquitin ubiquitin 9606
549 2K39 1 A Ubiquitin 8355
550 2JZZ 1 A Ubiquitin 9606
551 2JY6 1 A Ubiquitin protein 9606
552 2JWZ 1 A Ubiquitin 4932
553 2JVC 1 A ubiquitin_like protein
554 2JT4 2 B Ubiquitin SH3 domain sequence database residues 350-420 4932
555 2Z59 2 B Ubiquitin 9606
556 2JRI 2 B, C UBC protein sequence database residues 318-469 9606
557 2PE9 1 A, B Ubiquitin 9606
558 2PEA 1 A, B Ubiquitin 9606
559 2NR2 1 A Ubiquitin 9606
560 2DZI 1 A Ubiquitin-like protein 4A ubiquitin-like domain 9606
561 2G3Q 2 B Ubiquitin 4932
562 2DEN 2 B Ubiquitin 9606
563 2FUH 2 B Ubiquitin Ubiquitin 10116
564 1ZW7 1 A Ubiquitin 4932
565 1ZGU 2 B Ubiquitin 9606
566 1WY8 1 A Np95-like ring finger protein, isoform a ubiquitin-like domain 9606 2.3.2.27 | Details
567 2BGF 1 A, B DI-UBIQUITIN ISOPEPTIDE BOND BETWEEN GLY76A AND LYS48B 9606
568 1XQQ 1 A ubiquitin 9606
569 1WR1 1 A Ubiquitin 4932
570 1WH3 1 A 59 kDa 2'-5'-oligoadenylate synthetase like protein ubiquitin like domain 9606
571 1V80 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
572 1V81 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
573 1Q5W 2 B Ubiquitin 9606
574 1Q0W 2 B Ubiquitin 4932
575 1OTR 2 B Ubiquitin 4932
576 1MG8 1 A Parkin ubiquitin-like domain 10090 2.3.2.31 | Details
577 1IYF 1 A parkin ubiquitin-like domain 9606 2.3.2.31 | Details
578 1G6J 1 A UBIQUITIN 9606
579 1FXT 2 B UBIQUITIN 9606
580 1D3Z 1 A PROTEIN (UBIQUITIN) 9606
581 1C3T 1 A PROTEIN (1D8 UBIQUITIN) 9606
582 1UD7 1 A PROTEIN (UBIQUITIN CORE MUTANT 1D7) 9606
583 1BT0 1 A PROTEIN (UBIQUITIN-LIKE PROTEIN 7, RUB1) 3702