6MSB

Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome


Sequence Similarity Clusters for the Entities in PDB 6MSB

Entity #1 | Chains: U
26S proteasome non-ATPase regulatory subunit 1 protein, length: 953 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 2042
95 % 1 31 2215
90 % 1 31 2322
70 % 1 32 2322
50 % 1 32 2345
40 % 7 56 1321
30 % 7 56 1361
Entity #10 | Chains: d
26S proteasome non-ATPase regulatory subunit 8 protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 16 4252
95 % 1 16 5075
90 % 1 20 4021
70 % 1 20 4026
50 % 1 20 3959
40 % 1 20 3938
30 % 1 20 3849
Entity #11 | Chains: e
26S proteasome complex subunit SEM1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 33 1517
95 % 5 33 1982
90 % 5 33 2046
70 % 5 33 2101
50 % 5 35 2011
40 % 5 35 2047
30 % 5 35 2078
Entity #12 | Chains: f
26S proteasome non-ATPase regulatory subunit 2 protein, length: 908 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1868
95 % 1 33 2090
90 % 1 33 2168
70 % 1 30 2511
50 % 1 30 2540
40 % 6 53 1428
30 % 6 53 1459
Entity #13 | Chains: A
26S proteasome regulatory subunit 7 protein, length: 433 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2845
95 % 1 25 2850
90 % 1 25 2914
70 % 6 49 1445
50 % 6 49 1483
40 % 6 49 1533
30 % 6 49 1561
Entity #14 | Chains: B
26S proteasome regulatory subunit 4 protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2879
95 % 1 21 3520
90 % 1 21 3596
70 % 6 39 1824
50 % 6 39 1845
40 % 6 39 1898
30 % 6 39 1928
Entity #15 | Chains: C
26S proteasome regulatory subunit 8 protein, length: 398 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1799
95 % 1 30 2366
90 % 1 30 2342
70 % 6 55 1283
50 % 6 77 625
40 % 11 147 395
30 % 11 147 410
Entity #16 | Chains: D
26S proteasome regulatory subunit 6B protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 2078
95 % 1 31 2270
90 % 1 31 2325
70 % 1 31 2387
50 % 6 55 1316
40 % 6 55 1359
30 % 11 101 728
Entity #17 | Chains: E
26S proteasome regulatory subunit 10B protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 2053
95 % 1 31 2231
90 % 1 31 2285
70 % 1 31 2345
50 % 6 49 1490
40 % 12 147 395
30 % 12 147 410
Entity #18 | Chains: F
26S proteasome regulatory subunit 6A protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 2059
95 % 1 22 3307
90 % 1 22 3574
70 % 1 22 3399
50 % 6 46 1574
40 % 6 46 1637
30 % 12 101 728
Entity #19 | Chains: u,w
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1644
95 % 434 525 4
90 % 277 351 19
70 % 489 586 9
50 % 507 607 10
40 % 507 611 12
30 % 519 630 18
Entity #2 | Chains: V
26S proteasome non-ATPase regulatory subunit 3 protein, length: 534 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 27 2061
95 % 1 31 2261
90 % 1 31 2317
70 % 1 31 2377
50 % 1 31 2412
40 % 1 31 2432
30 % 1 31 2447
Entity #20 | Chains: G,g
Proteasome subunit alpha type-6 protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 51 503
95 % 25 55 579
90 % 25 55 612
70 % 25 55 632
50 % 312 364 53
40 % 317 370 59
30 % 1947 2291 2
Entity #21 | Chains: H,h
Proteasome subunit alpha type-2 protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 45 543
95 % 25 54 586
90 % 25 54 613
70 % 25 54 639
50 % 28 58 599
40 % 317 369 58
30 % 1948 2291 2
Entity #22 | Chains: I,i
Proteasome subunit alpha type-4 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 45 542
95 % 25 54 587
90 % 25 54 614
70 % 25 54 641
50 % 315 367 46
40 % 317 369 60
30 % 1949 2291 2
Entity #23 | Chains: J,j
Proteasome subunit alpha type-7 protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 44 560
95 % 25 55 583
90 % 25 55 608
70 % 25 55 640
50 % 314 366 47
40 % 328 396 21
30 % 1950 2291 2
Entity #24 | Chains: K,k
Proteasome subunit alpha type-5 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 48 479
95 % 25 54 585
90 % 25 54 611
70 % 25 54 638
50 % 316 368 45
40 % 316 368 61
30 % 1951 2291 2
Entity #25 | Chains: L,l
Proteasome subunit alpha type-1 protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 44 562
95 % 25 55 582
90 % 25 55 607
70 % 25 55 636
50 % 25 55 674
40 % 25 55 707
30 % 25 55 738
Entity #26 | Chains: M,m
Proteasome subunit alpha type-3 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 46 465
95 % 26 55 479
90 % 26 55 507
70 % 26 55 540
50 % 62 100 336
40 % 64 102 339
30 % 1952 2291 2
Entity #27 | Chains: N,n
Proteasome subunit beta type-6 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 18 1867
95 % 2 18 2417
90 % 3 23 1994
70 % 3 23 2049
50 % 3 23 2077
40 % 3 23 2111
30 % 3 23 2143
Entity #28 | Chains: O,o
Proteasome subunit beta type-7 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 18 1871
95 % 2 18 2430
90 % 3 23 2005
70 % 3 23 2060
50 % 6 26 1775
40 % 6 26 1825
30 % 6 26 1855
Entity #29 | Chains: P,p
Proteasome subunit beta type-3 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 44 561
95 % 25 54 584
90 % 25 54 609
70 % 25 54 637
50 % 312 360 55
40 % 317 366 62
30 % 317 366 66
Entity #3 | Chains: W
26S proteasome non-ATPase regulatory subunit 12 protein, length: 456 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1931
95 % 1 32 2170
90 % 1 32 2226
70 % 1 32 2296
50 % 1 32 2332
40 % 6 56 1328
30 % 6 56 1371
Entity #30 | Chains: Q,q
Proteasome subunit beta type-2 protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 44 566
95 % 25 54 581
90 % 25 54 606
70 % 25 54 635
50 % 25 54 668
40 % 314 363 66
30 % 316 365 68
Entity #31 | Chains: R,r
Proteasome subunit beta type-5 protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 17 2068
95 % 2 17 2623
90 % 3 22 2135
70 % 3 22 2224
50 % 4 23 2068
40 % 4 23 2123
30 % 4 23 2155
Entity #32 | Chains: S,s
Proteasome subunit beta type-1 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 19 1754
95 % 3 19 2241
90 % 4 24 1875
70 % 4 24 1932
50 % 4 24 1976
40 % 291 330 83
30 % 291 330 89
Entity #33 | Chains: T,t
Proteasome subunit beta type-4 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 19 1722
95 % 3 19 2250
90 % 4 24 1895
70 % 4 24 1938
50 % 4 24 1982
40 % 4 24 2018
30 % 4 24 2042
Entity #4 | Chains: X
26S proteasome non-ATPase regulatory subunit 11 protein, length: 422 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1650
95 % 1 32 2122
90 % 1 32 2184
70 % 3 34 2082
50 % 3 34 2128
40 % 3 34 2165
30 % 3 34 2198
Entity #5 | Chains: Y
26S proteasome non-ATPase regulatory subunit 6 protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1917
95 % 1 32 2145
90 % 1 32 2206
70 % 1 32 2274
50 % 1 32 2315
40 % 1 32 2341
30 % 6 56 1375
Entity #6 | Chains: Z
26S proteasome non-ATPase regulatory subunit 7 protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 3703
95 % 1 21 3620
90 % 1 21 3687
70 % 1 21 3687
50 % 1 21 3626
40 % 7 40 1882
30 % 7 40 1910
Entity #7 | Chains: a
26S proteasome non-ATPase regulatory subunit 13 protein, length: 376 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 2110
95 % 1 32 2144
90 % 1 32 2205
70 % 1 32 2273
50 % 1 32 2314
40 % 1 32 2340
30 % 6 57 1351
Entity #8 | Chains: b
26S proteasome non-ATPase regulatory subunit 4 protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 3659
95 % 1 21 3559
90 % 1 21 3628
70 % 1 21 3624
50 % 1 21 3558
40 % 1 21 3537
30 % 1 21 3472
Entity #9 | Chains: c
26S proteasome non-ATPase regulatory subunit 14 protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1692
95 % 1 32 2128
90 % 1 32 2189
70 % 1 32 2257
50 % 6 57 1273
40 % 6 57 1316
30 % 6 57 1353

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6Q00 1 A Ubiquitin 9606
2 6Q01 1 A, B Ubiquitin 9913
3 5TOG 1 A Polyubiquitin-B 9606
4 5NVG 1 A Polyubiquitin-B 9606
5 5TOF 1 A Polyubiquitin-B 9606
6 4XOF 1 A Ubiquitin 9606
7 3A9J 1 A Ubiquitin 10090
8 3A9J 2 B Ubiquitin 10090
9 5GOB 1 A Ubiquitin 9606
10 5GOB 2 B D-ubiquitin 9606
11 5W46 1 A, B Polyubiquitin-B 9606
12 5GOD 1 A, B Ubiquitin 9606
13 5GOD 2 C, D D-ubiquitin 9606
14 5XVE 2 B Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9913
15 3NHE 2 B Ubiquitin 9606
16 5DK8 1 A, B Polyubiquitin-B Ubiquitin, UNP residues 2-75 9606
17 1YJ1 1 A, B, C Ubiquitin residues 1-76
18 6SQO 3 C, F Ubiquitin-40S ribosomal protein S27a GSGGS LINKER AT THE N-TERMINUS RESULTED FROM CLONING. G76 IN CHAINS C and F ARE COVALENTLY LINKED TO K85 SIDE CHAIN IN CHAINS B AND E, RESPECTIVELY. 9606
19 5NL4 1 A, B, C Polyubiquitin-C 9606
20 5V1Y 2 C, D Ubiquitin 9606
21 4M0W 2 B Ubiquitin 9913
22 4Y1H 1 A Ubiquitin-40S ribosomal protein S27a K33 linked tri-Ubiquitin. 9913
23 2GBJ 1 A, B Ubiquitin 9606
24 1YIW 1 A, B, C Ubiquitin 9031
25 1OGW 1 A UBIQUITIN LEF IS (4S)-5-FLUORO-L-LEUCINE RESIDUES 1-76 9606
26 2WWZ 1 A, B UBIQUITIN 9913
27 5KYC 2 C Polyubiquitin-B UNP residues 1-76 9606
28 4IUM 2 B Ubiquitin UNP residues 1-75 9606
29 4GU2 1 A Ubiquitin 5759
30 3A9K 1 A Ubiquitin 10090
31 3A9K 2 B Ubiquitin 10090
32 4HK2 1 A, B, C, D Ubiquitin 9606
33 5KYF 2 C Polyubiquitin-B UNP residues 1-76 9606
34 1XD3 2 B, D UBC protein 9606
35 5NLF 1 A, B, C Polyubiquitin-C 9606
36 4ZPZ 1 A, B Polyubiquitin-B ubiquitin, UNP residues 1-73 9606
37 6E2B 1 A, C, E, G, I, P Ubiquitin 9913
38 4UN2 1 A UBIQUITIN 9606
39 5VBT 1 A, B UBH04 32630
40 4PIH 1 A, B Ubiquitin 9606
41 2ZCC 1 A, B, C Ubiquitin 9913
42 6NYO 2 E Ubiquitin 4896
43 4PIJ 1 A, B Ubiquitin 9606
44 5NLI 1 A, B, C Polyubiquitin-C 9606
45 5O6T 2 C, D Polyubiquitin-B A variant of ubiquitin identified from a phage-display library 9606
46 5YT6 1 A, C, E, G Ubiquitin 9606
47 4V3L 2 B, D POLYUBIQUITIN-C G76 IN CHAIN B IS COVALENTLY LINKED TO K85 SIDE CHAIN IN CHAIN A. RESIDUES 77-152 9606
48 4LJO 2 B Polyubiquitin-C unp residues 77-152 9913
49 3BY4 2 B Ubiquitin 9606
50 6FDK 2 B Polyubiquitin-B 9606
51 5K9P 1 A Polyubiquitin-B 9606
52 5NLJ 1 A, B, C Polyubiquitin-B 9606
53 5KYD 1 D Polyubiquitin-B UNP residues 1-76 9606
54 4XYZ 1 A, B Polyubiquitin-C UNP residues 77-152 9913
55 3M3J 1 A, B, C, D, E, F Ubiquitin 9913
56 2ZNV 2 B, E Ubiquitin 10090
57 2ZNV 3 C, F Ubiquitin 10090
58 2GBM 1 A, B, C, D Ubiquitin 9606
59 5OXH 1 A Ubiquitin T66V/L67N mutant 9606
60 5EMZ 1 A, C, E Polyubiquitin-B 9606
61 5EMZ 2 B, D, F Polyubiquitin-B 9606
62 6B7M 2 B, C Polyubiquitin-C 9606
63 6HEI 2 B Polyubiquitin-B 9606
64 3VUX 1 A, B, C Polyubiquitin-C Ubiquitin 9606
65 2GBN 1 A Ubiquitin 9606
66 2ZCB 1 A, B, C Ubiquitin 9606
67 5OXI 1 A, B Ubiquitin L67S mutant 9606
68 4K1R 2 B, D Polyubiquitin-C 9606
69 6HPR 2 B, D Polyubiquitin-B Ubiquitin residues 1-76 contains N-terminal GSGGS after TEV cleavage. Chain D Gly76 forms isopeptide linkage with Chain C Lys85. 9606
70 3PRP 2 B, D Ubiquitin 9606 3.4.19.12 | Details
71 4I6N 2 B, D Ubiquitin 9606
72 3V6C 2 B Ubiquitin 9606
73 5AF5 1 A POLYUBIQUITIN-C 9606
74 5J8P 1 A ubiquitin 9606
75 5J8P 2 B D-ubiquitin 9606
76 4K7U 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
77 6EI1 2 B Polyubiquitin-B 9606
78 6FGE 2 C Polyubiquitin-B 9606
79 2J7Q 2 B, D UBIQUITIN THE C-TERMINAL GLY 76 IS REPLACED BY THE VINYLMETHYLESTER MOIETY UBIQUITIN FUSED TO VINYLMETHYLESTER, UBVME, RESIDUES 1-75 9606
80 3NS8 1 A, B Ubiquitin 9606
81 5GOJ 1 A Ubiquitin 9606
82 5GOJ 2 B D-ubiquitin 9606
83 6OI4 2 C, D ubiquitin 9606
84 1UBI 1 A UBIQUITIN 9606
85 2D3G 1 A, B ubiquitin 9913
86 5GOC 1 A Ubiquitin 9606
87 5GOC 2 D D-ubiquitin 9606
88 5X3N 1 A Polyubiquitin-B UNP residues 1-76 9606
89 5XIU 2 B Ubiquitin-40S ribosomal protein S27a 10090
90 5TXK 2 B Polyubiquitin-B 9606
91 5WFI 2 C, D Ubiquitin 9606
92 6W9R 1 M, N, O, P, Q, R, S, T, U, V, W, X Ubiquitin 9606
93 1UBQ 1 A UBIQUITIN 9606
94 6B7O 2 B, C Polyubiquitin-C 9606
95 4ZFR 2 B ubiquitin unp residues 77-152 9606
96 4MSM 2 B, D Ubiquitin UNP residues 77-152 9606
97 4HJK 1 A Ubiquitin UNP residues 87-162 9606
98 6GLC 2 B Polyubiquitin-B 9606
99 3N32 1 A Ubiquitin 9606
100 5L8H 2 B Polyubiquitin-B Recombinant expression followed by chemical synthesis. 9606
101 3ONS 1 A Ubiquitin 9606
102 5XU8 2 B Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9913
103 3MHS 4 D Ubiquitin 9606
104 5M93 1 A, B, C Polyubiquitin-B 9606
105 4K7W 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
106 2HD5 2 B Polyubiquitin residues 1-76 9913
107 5NMC 1 A, B, C Polyubiquitin-C 9606
108 5GOI 1 A, B Ubiquitin 9606
109 5GOI 2 C, D D-ubiquitin 9606
110 1WRD 2 B Ubiquitin 9913
111 5GVI 2 B ubiquitin 10090
112 5GVI 3 C ubiquitin 10090
113 4K7S 1 A, B, C ubiquitin UNP residues 1-73 9606 6.3.2.19 | Details
114 5CVM 2 B Polyubiquitin-B UNP residues 1-76 9606
115 2FCS 1 A, B Ubiquitin residues 1-76
116 4Q5E 2 B Polyubiquitin 4932 6.3.2.19 | Details
117 5V1Z 2 C, D Ubiquitin 9606
118 3ALB 1 A, B, C, D ubiquitin 9606
119 6GZS 2 B Polyubiquitin-B 9606
120 5D0M 3 B Polyubiquitin-B UNP residues 1-76 9606
121 5XIS 2 B, E Ubiquitin-40S ribosomal protein S27a 10090
122 5XIS 3 C, F Ubiquitin-40S ribosomal protein S27a 10090
123 4PIG 1 A, B, C, D Ubiquitin 9606
124 5X3M 1 A Polyubiquitin-B 9606
125 5X3M 2 D D-ubiquitin D-Ub-S65E-NH2 9606
126 5NL5 1 A, B, C Polyubiquitin-B 9606
127 6SQS 3 C, F Ubiquitin-40S ribosomal protein S27a Contains a GSGGS at the N-terminus resulted from cloning. G76 in Chains C and F form a covalent bond with K85 sidechain in Chains B and E, respectively. 9606
128 6ML1 2 C, E Ubiquitin variant 15.1a This is a Ubv (ubiquitin variant) selected by phage display to bindthe USP15 USP domain with high affinity 9606
129 4MSQ 2 B, D Ubiquitin UNP residues 77-152 9606
130 4LDT 2 B Ubiquitin aldehyde 9606
131 4LDT 4 D Ubiquitin 9606
132 3VUW 1 A, B, C Polyubiquitin-C Ubiquitin 9606
133 3TMP 2 B, D, F, H Polyubiquitin-C Ubiquitin-like 1 9606
134 2QHO 1 A, C, E, G Ubiquitin 9913
135 3H7P 1 A Ubiquitin 9606
136 3H7P 2 B Ubiquitin 9606
137 4WZP 1 A, B, C, D, E, F, G, H ubiquitin phosphorylation at Ser65 UNP residues 1-76 9606
138 3EHV 1 A, B, C Ubiquitin 9606 6.3.2.19 | Details
139 5GO7 1 A Ubiquitin 9606
140 5GO7 2 B D-ubiquitin 9606
141 6CPM 2 E, F Ubiquitin variant 15.1d This is a Ubv (ubiquitin variant) selected by phage display to bind the USP15 USP domain with high affinity 9606
142 1P3Q 2 U, V Ubiquitin 9913
143 2OOB 2 B Ubiquitin 9913
144 5ULF 2 B, D Ubiquitin 9606
145 5KYE 2 C, D Polyubiquitin-B UNP residues 1-76 9606
146 6ISU 2 B Ubiquitin 9606
147 6ISU 3 C Ubiquitin 9606
148 6ULH 3 E Ubiquitin 9606
149 5ULH 2 B Ubiquitin 9606
150 3HM3 1 A, B, C, D Ubiquitin 9606
151 5LRW 2 B, D Polyubiquitin-B Gly76 was replaced with 2-bromoethylamine 9606
152 5GOK 1 A Ubiquitin 9606
153 5GOK 2 B D-ubiquitin 9606
154 4WLR 3 C Polyubiquitin-B 9606
155 3WWQ 1 A, D, G, J Ubiquitin 10090
156 3WWQ 2 B, E, H, K Ubiquitin 10090
157 6K9P 2 G Ubiquitin 9606
158 5JG6 2 B, C Polyubiquitin-B 9606
159 3EFU 1 A Ubiquitin 9606
160 4Q5H 2 B Polyubiquitin 4932 6.3.2.19 | Details
161 5AF4 1 A, B, C, D, E, F, G, H UBIQUITIN ISOPEPTIDE LINKAGES BETWEEN A76 C AND B33 NZ, C76 C AND D33 NZ, E76 C AND F33 NZ 9606
162 4V3K 2 B, E POLYUBIQUITIN-C LYS85 IN CHAINS A AND D IS COVALENTLY LINKED TO GLY76 IN CHAINS B AND E, RESPECTIVELY. RESIDUES 77-152 9606
163 4IG7 2 B Ubiquitin 9606
164 2JF5 1 A, B UBIQUITIN ISO-PEPTIDE LINK BETWEEN A-LYS63 AND B-GLY76 9606
165 5MN9 1 A, B Ubiquitin-40S ribosomal protein S27a 9913
166 5WVO 1 A, B Ubiquitin 9606
167 3V6E 2 B Ubiquitin 9606
168 1UZX 2 B UBIQUITIN 9913
169 5YDR 1 A, D Polyubiquitin-B UNP residues 1-73 9606
170 1S1Q 2 B, D ubiquitin 9606
171 6NYA 2 B, E Ubiquitin residues 77-152 4565
172 6SQR 3 C, F, L Ubiquitin-40S ribosomal protein S27a Contains a GSGGS at the N-terminus resulted from cloning. G76 in Chains C, F, L form a covalent bond with K85 sidechain in Chains B, E, K, respectively. 9606
173 6SQR 6 I Polyubiquitin-C Contains a GSGGS at the N-terminus resulted from cloning. G76 in Chain I form a covalent bond with K85 sidechain in Chain H. 9606
174 6QML 2 B, E Polyubiquitin-B Met 1 substituted with Norleucine (NLE) 9606
175 6QML 3 C, F Polyubiquitin-C 9606
176 4LJP 2 B Polyubiquitin-C unp residues 77-152 9913
177 3VUY 1 A, B, C Polyubiquitin-C Ubiquitin 9606
178 3PHW 2 B, D, F, H Ubiquitin-40S ribosomal protein S27a UNP residues 1-75 9606
179 4PQT 2 B Protein UBBP4 unp residues 77-152 9606
180 5BZ0 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin from bovine erythrocytes 9913
181 2GBR 1 A, B, C Ubiquitin 9606
182 4XKL 1 A, C Ubiquitin 9606
183 4FJV 2 B, D Polyubiquitin-C 9606
184 6P5B 3 E Ubiquitin 9606
185 5DFL 1 B Ubiquitin 9606
186 2C7N 2 B, D, F, H, J, L UBIQUITIN 9913
187 6UPU 2 B, C, D, F, G, H, J, K, L, N, O, P Ubiquitin 9606
188 5HPS 2 B Ubiquitin variant P1.1 9606
189 5GOH 1 A Ubiquitin 9606
190 5GOH 2 D D-ubiquitin 9606
191 3ZNI 4 D, H, L, P POLYUBIQUITIN-C CARBONYL CARBON OF G76 IN CHIANS D, H, L AND P FORMS AN ISOPEPTIDE LINKAGE WITH THE SIDECHAIN OF K85 IN CHAINS C, G, K AND O, RESPECTIVELY. GSGGS LINKER AT THE N- TERMINUS OF PROTEIN RESULTED FROM CLONING RESIDUES 77-152 9606
192 2G45 2 B, E Ubiquitin 9606
193 6AQR 4 D Polyubiquitin-C 9606
194 5MNJ 2 B, F Polyubiquitin-B gsggs linker at the N-terminus resulted from cloning. G76 in chain B is covalently linked to K85 side chain in Chain A. 9606
195 5ZQ3 2 C, D Ubiquitin 9606
196 5ZQ4 2 C, D ubiquitin 9606
197 4GSW 1 A, B Ubiquitin 5759
198 4RF1 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
199 1SIF 1 A ubiquitin 9606
200 5JBY 1 A, C, E ubiquitin 9606
201 5JBY 2 B, D, F D-ubiquitin 9606
202 5IFR 2 B Polyubiquitin-B 9606
203 2IBI 2 B Ubiquitin 9606
204 5L6H 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
205 6W9S 2 B Ubiquitin 9606
206 6D4P 2 C Ubiquitin Variant Ubv.D1.1 9606
207 6JB7 1 B Ubiquitin 9606
208 5GOG 1 A Ubiquitin 9606
209 5GOG 2 B D-ubiquitin 9606
210 2GBK 1 A, B, C, D Ubiquitin 9606
211 4AUQ 3 C, F POLYUBIQUITIN-C UBIQUITIN, RESIDUES 1-76 9606
212 4NNJ 2 B, D, E Uba1 UNP residues 1-76 4932
213 4Z9S 1 A, B, C, D Ubiquitin-40S ribosomal protein S27a UNP RESIDUES 1-76 9913
214 6DGF 2 B Polyubiquitin-B 9606
215 2XEW 1 A, B, C, D, E, F, G, H, I, J, K, L UBIQUITIN UBIQUITIN POLYMER LINKED THROUGH LYS11 IN AN ISOPEPTIDE LINKAGE 9606
216 2WDT 2 B, D UBIQUITIN C-TERMINAL GLY76 OF WILDTYPE UBIQUITIN IS REPLACED BY A VINYL METHYLESTER MOIETY (UBVME) RESIDUES 1-75 9606
217 1AAR 1 A, B DI-UBIQUITIN 9913
218 4AP4 3 C, F UBIQUITIN C ISOPEPTIDE AMIDE LINKED TO UBCH5A (CHAIN B AND CHAIN E) RESIDUES 76-152 9606
219 4UEL 2 B POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH-L5 9606
220 4II2 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 4896
221 6OQ1 1 A, B Ubiquitin 9606
222 6OQ1 2 C, D Ubiquitin 9606
223 6OQ1 3 E, F Ubiquitin 9606
224 6RYA 2 B, D, F Polyubiquitin-C 9606
225 4ZFT 2 B, D Polyubiquitin-B unp residues 77-152 9606
226 2WX0 1 A, B, E, F UBIQUITIN 9913
227 3A1Q 1 A, D Ubiquitin 10090
228 3A1Q 2 B, E Ubiquitin 10090
229 5HPL 2 C, D Ubiquitin variant R5.4 9606
230 5TR4 2 B, D Ubiquitin 9913
231 4BOS 2 C, E POLYUBIQUITIN-C RESIDUES 1-76 9606
232 3H7S 1 A, B Ubiquitin 9606
233 3C0R 2 B, D Ubiquitin 9606
234 5AIU 3 C, F POLYUBIQUITIN-C CHAIN B COVALENTLY LINKED TO CHAINS C, CHAIN E IS COVALENTLY LINKED TO CHAIN F UNP RESIDUES 1-76 9606
235 6PGV 2 B Polyubiquitin-B 9606
236 4S22 1 A, B, C, D Ubiquitin residues 77-152 9913
237 2C7M 2 B UBIQUITIN 9913
238 1TBE 1 A, B TETRAUBIQUITIN 9606
239 6NXK 1 A, B Polyubiquitin-C 9606
240 3PT2 2 B Ubiquitin B 9606
241 5VZW 2 C, D Ubiquitin 9606
242 3PRM 2 B, D Ubiquitin 9606 3.4.19.12 | Details
243 6KG6 2 C Ubiquitin-40S ribosomal protein S27a 9606
244 4R62 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin 9606
245 5EYA 3 C, D Polyubiquitin-B UNP residues 1-76 9606
246 5GO8 1 A ubiquitin 9606
247 5GO8 2 B D-ubiquitin 9606
248 3A33 2 B Ubiquitin 9606
249 3VHT 3 C Ubiquitin 10090
250 5XIT 1 D, F Ubiquitin-40S ribosomal protein S27a 10090
251 5XIT 3 B, H Ubiquitin-40S ribosomal protein S27a 10090
252 6ASR 1 A, C Ubiquitin residues 1-76 9606
253 2FCN 1 A, B Ubiquitin residues 1-76
254 4DHJ 2 B, F, J, M Ubiquitin aldehyde 9606
255 4DHJ 3 D, H Ubiquitin 9606
256 3ZNH 2 B POLYUBIQUITIN-B GLY76 IS REPLACED WITH A PROPARGYL GROUP 9606
257 4BBN 2 C POLYUBIQUITIN-B RESIDUES 1-76 9913
258 4BBN 3 F POLYUBIQUITIN-B RESIDUES 229-304 9913
259 4NQL 2 B Ubiquitin 10090
260 4NQL 3 C Ubiquitin 10090
261 6NJG 2 C Polyubiquitin-B 9606
262 1NBF 2 C, D Ubiquitin aldehyde 9606
263 2O6V 1 A, C, E, G Ubiquitin 9606
264 2O6V 2 B, F Ubiquitin 9606
265 2O6V 3 D, H Ubiquitin 9606
266 3OFI 2 C, D Ubiquitin 9606
267 6UMS 3 E Ubiquitin 9606
268 3AUL 1 A, B Polyubiquitin-C Ubiquitin 9606
269 3UGB 2 B Polyubiquitin-C unp residues 1-76 9606
270 5JBV 1 A Ubiquitin 9606
271 5JBV 2 B D-ubiquitin 9606
272 5X3O 1 A Polyubiquitin-B UNP residues 1-76 9606
273 5X3O 2 D D-ubiquitin 9606
274 5ULK 2 B Ubiquitin 9606
275 5ZQ5 2 B, D Ubiquitin 9606
276 6FX4 2 B, D Polyubiquitin-B 9606
277 3NOB 1 A, B, C, D, E, F, G, H Ubiquitin 9606
278 6CRN 2 E, F, G, H Ubiquitin variant 15.2 This is a Ubv (ubiquitin variant) selected by phage display to bind the USP15 USP domain with high affinity 9606
279 6D68 2 C, D Ubv.G1.1 9606
280 6QK9 1 A, B, C, D, E, F, G, H, I, J, K, L Polyubiquitin-B 9606
281 3IFW 2 B Ubiquitin 9606
282 3N3K 2 B Ubiquitin 9606
283 6A6I 2 B, D Polyubiquitin-B UNP residues 1-76 9606
284 6A6I 3 F, H Polyubiquitin-B UNP residues 1-77 9606
285 2FCM 1 A, B Ubiquitin residues 1-76
286 6JWI 1 G, I Ubiqutin 10090
287 4KSK 2 C, D Polyubiquitin-C unp residues 76-152 9606
288 5L6J 2 B, D Ubiquitin-40S ribosomal protein S31 4932
289 5HPK 2 B Ubiquitin variant NL.1 9606
290 5OHL 2 I, J, K, L, M, N, O, P Polyubiquitin-B 9606
291 3I3T 2 B, D, F, H Ubiquitin 9606
292 5FER 3 C, F Ubiquitin-40S ribosomal protein S27a 9913
293 5IBK 3 C, F Polyubiquitin-B UNP residues 75-150 9606
294 5OHK 2 B Polyubiquitin-B 9606
295 1CMX 2 B, D PROTEIN (UBIQUITIN YUH1-UBAL) UBIQUITIN C-TERMINUS MODIFIED TO AN ALDEHYDE ALL 9606 3.1.2.15 | Details
296 6JKY 3 C, F Ub 48269
297 3OJ3 1 A, B, C, D, E, F, G, H Ubiquitin Ubiquitin, UNP residues 1-76 9606
298 5N38 2 B Polyubiquitin-B Ser65 is phosphorylated 9606
299 3O65 2 B, D, F, H Ubiquitin 9606
300 5CRA 2 C, D Polyubiquitin-B UNP residues 1-75 9606
301 6IF1 2 C, D Ubiquitin 9606
302 5U4P 3 C Ubiquitin-40S ribosomal protein S31 4932
303 5L6I 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
304 6O82 2 B, D Ubiquitin-60S ribosomal protein L40 residues 1-76 4896
305 5XPK 1 A Ubiquitin 9606
306 5XPK 2 B D-ubiquitin 9606
307 5XDP 1 B D-ubiquitin 9606
308 5XDP 2 A ubiquitin-B K11/48-branched teraubiquitin 9606
309 5O76 3 E, F UbV.pCBL ubiquitin variant 9606
310 5D0K 3 B, E, H, K Polyubiquitin-B UNP residues 1-76 9606
311 5OHV 1 A, C Ubiquitin 9606
312 5KNL 2 B, E Ubiquitin 84753
313 4I6L 2 B Ubiquitin UNP residues 77-150 9606
314 5TUT 2 B Ubiquitin 9606
315 3OLM 2 D Ubiquitin 4932
316 3CMM 2 B, D Ubiquitin 559292
317 4MDK 2 E, F, G, H Ubiquitin UNP residues 76-152 9606
318 5N2W 2 B Polyubiquitin-B Ser65 is phosphorylated to give SEP65 9606
319 7BXG 3 D Polyubiquitin-C 9606
320 4MM3 1 A Ubiquitin UNP residues 1-76 9606
321 2FIF 1 A, C, E Ubiquitin 9913
322 5JQS 2 D Ubiquitin-40S ribosomal protein S27a 9913
323 5YDK 2 B, E, H, K Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9606
324 5YDK 3 C, D, I, J Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9606
325 2XBB 2 C, D UBIQUITIN 9913
326 2GMI 3 C Ubiquitin 9606
327 4HCN 2 B Polyubiquitin unp RESIDUES 1-76 4932
328 5J26 1 B Ubiquitin Variant i53 9606
329 6KL4 3 C Ub 9606
330 3DVG 3 X Ubiquitin D77 9606
331 3DVG 4 Y Ubiquitin 9606
332 1WR6 2 E, F, G, H ubiquitin 9913
333 3LDZ 1 E, F, G Ubiquitin 9913
334 3PTF 2 C, D Polyubiquitin-B Ubiquitin 9606
335 6BVA 3 A, B Polyubiquitin-B 9606
336 5ZQ7 2 B, D Ubiquitin 9606
337 6XAA 2 B Ubiquitin-propargylamide 9606
338 3RUL 1 A, B, C, D Ubiquitin 9606
339 5BNB 2 E, F, G, I Polyubiquitin-B 9606
340 6K2U 1 B Polyubiquitin-C 9606
341 5LRX 2 B, D Polyubiquitin-B Gly76 was replaced with propargylamide 9606
342 5CAW 2 B, D Polyubiquitin-B phosphorylated at Ser65 Gly76 exchanged with chemical probe, bromopropylamine. The bromide was lost during the coupling. 9606
343 4XOK 1 A, B, C Ubiquitin 9606
344 3MTN 2 B, D UBIQUITIN VARIANT UBV.21.4 9606
345 5ZQ6 2 B, D Ubiquitin 9606
346 5LRV 2 B Polyubiquitin-B Lys11 was replaced with a diaminobutyric acid (DAB) residue 9606
347 5LRV 3 C Polyubiquitin-B Gly76 was replaced with a ligation handle for diubiquitin probe generation 9606
348 6S53 2 D, F, J, L Polyubiquitin-C 9606
349 3DVN 3 U, X Ubiquitin D77 9606
350 3DVN 4 V, Y Ubiquitin 9606
351 5L8W 3 C Polyubiquitin-B Recombinant expression followed by chemical synthesis 9606
352 6KFP 3 D Ubiquitin-40S ribosomal protein S27a 9606
353 1F9J 1 A, B TETRAUBIQUITIN 9606
354 6BYH 3 C, D, H Polyubiquitin-B 9606
355 6NXL 1 A, B, C, D, E, F, G, H Polyubiquitin-B 9606
356 2FID 1 A Ubiquitin 9913
357 5OHP 2 B, C Polyubiquitin-B 9606
358 4HXD 1 A, C Polyubiquitin-C 9606 3.4.19.12 | Details
359 1YD8 1 U, V UBIQUIN 9913
360 4BOZ 2 B, C, E UBIQUITIN-C 9606
361 5HPT 2 B, E, H Ubiquitin variant P2.3 9606
362 3WXG 2 B, E Ubiquitin 10090
363 3WXG 3 C, F Ubiquitin UNP residues 1-72 10090
364 6CP2 3 C Polyubiquitin-B 9606
365 4XKH 1 A, B, D, F, G, I Polyubiquitin-C UNP RESIDUES 77-152 9913
366 3IHP 2 C, D Ubiquitin 9606
367 6D6I 3 C, F Ubv.V1.1 9606
368 5LN1 2 U Polyubiquitin-B 9606
369 3K9P 2 B Ubiquitin 9606
370 4BVU 3 C UBIQUITIN OXYESTER LINK BETWEEN G76 AND UBCH5C S85 9606
371 6JB6 1 B Ubiquitin 9606
372 5CVN 3 D Polyubiquitin-B UNP residues 1-76 9606
373 3JSV 1 A Ubiquitin 9606
374 3JSV 2 B Ubiquitin 9606
375 3TBL 2 D, E Ubiquitin 9606
376 2HTH 1 A Ubiquitin 9606
377 3KW5 2 B Ubiquitin 9606
378 6EQI 1 A Ubiquitin 9606
379 5E6J 2 B, E ubiquitin 32630
380 5E6J 3 C, F Polyubiquitin-B 32630
381 2XK5 1 A UBIQUITIN 9606
382 2XK5 2 B UBIQUITIN 9606
383 6OAM 2 C, D Ubiquitin 9606
384 4JQW 2 C Polyubiquitin-C Ubiquitin 9606
385 4RF0 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
386 3KVF 2 B Ubiquitin 9606
387 6FYH 2 B Polyubiquitin-B 9606
388 6O83 2 B, D Ubiquitin-60S ribosomal protein L40 residues 1-75 4896
389 5AF6 1 A, B, C, D, E UBIQUITIN ISOPEPTIDE BONDS ACROSS BETWEEN CHAINS, A76 C AND D33 NZ, B76 C AND A33 NZ, C76C AND B33 NZ, E76 C AND C33 NZ. ISOPEPTIDE BOND ACROSS THE ASU FOR, D76 C AND E33 NZ SYMM 9606
390 3H1U 1 A, B Ubiquitin 9913
391 6HEK 2 B, D Polyubiquitin-B 9606
392 6PZV 1 A, B, E, F Ubiquitin 9606
393 5JTJ 2 B Polyubiquitin-B 9606
394 2WX1 1 A, B UBIQUITIN 9913
395 6UMP 1 E Ubiquitin 9606
396 4WUR 2 B Polyubiquitin-B UNP residues 1-76 9606
397 4II3 2 B, D Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 4896
398 5C7J 2 C, D Polyubiquitin-C UNP residues 1-74 9606
399 4S1Z 1 A, B, C, D, E Ubiquitin residues 1-76 9606
400 6DC6 2 B, D Ubiquitin 9606
401 4XOL 1 A, B Ubiquitin 9606
402 5JP3 2 B, D, F, H Polyubiquitin-B 9606
403 4P4H 3 S, T, U, W, X Ubiquitin-60S ribosomal protein L40 9606
404 5O44 1 A, E Ubiquitin 7370
405 5O44 2 B, C Polyubiquitin-B 9606
406 5O44 3 D, F Polyubiquitin-B 9606
407 3PHD 2 E, F, G, H Polyubiquitin 9606
408 5YIK 2 C, D, F ubiquitin UNP RESIDUES 1-76 9606
409 5ZBU 3 E Ubiquitin 9606
410 3N30 1 A, B Ubiquitin 9606
411 3ZLZ 1 A, B UBIQUITIN TRI-UBIQUITIN CHAIN LINKED VIA LYS6. K48R IN BOTH MOLECULES. ISOPEPTIDE LINKAGES ARE NOT RESOLVED. 9606
412 6W9D 3 C, F, I Ubiquitin Linked to Ube2d2 via isopeptide bond between G76 of ubiquitin and Lys85 of Ube2d2 9606
413 3JVZ 3 X, Y Ubiquitin 9606
414 4DHZ 2 B Ubiquitin aldehyde 9606
415 4DHZ 3 E Ubiquitin 9606
416 5YIJ 2 C, D, G Ubiquitin UNP RESIDUES 1-76 9606
417 5UDH 3 E Ubiquitin C variant Hexa-his N-terminal tagged protein UNP residues 17-92 9606
418 5AIT 3 C, F POLYUBIQUITIN-C UNP RESIDUES 1-76 9913
419 5O6S 1 A, B, C, D, E, F Polyubiquitin-B Variant of ubiquitin identified from phage-display 9606
420 3VFK 1 A ubiquitin, C-terminal fused by Cys-Lys-D-Ala-D-Ala 9606
421 5C7M 2 B, C Polyubiquitin-C UNP residues 1-75 9606
422 3JW0 3 X, Y Ubiquitin 9606
423 4LCD 3 E, F Ubiquitin UNP residues 1-75 9606
424 6DJ9 2 G, H, I, J, K, L Ubiquitin Variant UbV 15.D The following is a variant of ubiquitin selected by phage display to bind to the USP15 N-terminus 9606
425 4DDG 2 D, E, F, G, H, I, M, N, O, P, Q, R Polyubiquitin-C 9606
426 5JTV 2 B, D, F, H Polyubiquitin-B 9606
427 5OHN 2 B, D Polyubiquitin-B 9606
428 5TTE 3 F ubiquitin unp residues 1-76 4565
429 2FCQ 1 A, B Ubiquitin residues 1-76 9031
430 3EEC 1 A, B Ubiquitin 9606
431 5VNZ 3 C, F Ubiquitin 9606
432 6H4H 2 C, D Polyubiquitin-B 9606
433 4NQK 2 E, F, G, H, I, J Ubiquitin UNP residues 76-152 9606
434 6C16 3 D, H Polyubiquitin-B 9606
435 4DDI 2 D, E, F, G, H, I Polyubiquitin-C 9606
436 5H7S 1 E, F Ubiquitin-like 1 9606
437 5EDV 3 E, F, G, H Polyubiquitin-B UNP residues 1-76 9606
438 5CVO 3 C, F Polyubiquitin-B UNP residues 1-76 9606
439 4UF6 2 B, E, H, K POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH- L5 9606
440 5OHM 1 A, C, E, G, I, K Polyubiquitin-C 9606
441 4ZUX 10 X, c, h, m Polyubiquitin-B 9606
442 2DX5 2 B Ubiquitin 9913
443 3OJ4 2 B, E Ubiquitin Ubiquitin, UNP residues 1-76 9606
444 5VO0 3 C, F Ubiquitin 9606
445 6DJW 2 B Ubiquitin 9913
446 2AYO 2 B Ubiquitin 9606
447 5KHY 1 A Polyubiquitin-B 9606
448 5KHY 2 B Polyubiquitin-B 9606
449 6DJX 2 B Ubiquitin 9913
450 4JIO 2 U Ubiquitin 9606
451 4WHV 3 A, F, G, L Polyubiquitin-B unp residues 1-76 9606
452 6VEN 7 K Ubiquitin 9606
453 6TTU 7 U Polyubiquitin-C 9606
454 6VAE 3 C, D Ubiquitin isopeptide bond between C-terminus of ubiquitin (chain C) and Lys523 Nz of FANCI (chain A); isopeptide bond between C-terminus of ubiquitin (chain D) and Lys561 Nz of FANCD2 (chain B) 9606
455 6VAF 3 D Ubiquitin 9606
456 6TNF 3 C Polyubiquitin-C 9606
457 6V5D 1 A Ubiquitin 9606
458 6UYI 1 C Ubiquitin 9606
459 6UYI 2 D Ubiquitin 9606
460 6UYJ 1 C Ubiquitin 9606
461 6UYJ 2 D Ubiquitin 9606
462 6TBM 15 R Polyubiquitin-B 9606
463 6T9L 12 O Polyubiquitin-C 9606
464 6UH5 11 Q Ubiquitin 9606
465 6KOW 1 A Polyubiquitin-B 9606
466 6KOX 1 A Polyubiquitin-B 9606
467 6KNA 1 A Viral ubiquitin 307456
468 6KIU 11 O Ubiquitin 9606
469 6KIV 9 O Ubiquitin 9606
470 6KIW 9 O Ubiquitin 9606
471 6K4I 1 A ubiquitin 9606
472 6OQ2 1 B Ubiquitin 9606
473 6OQ2 2 D Ubiquitin 9606
474 6OQ2 3 E Ubiquitin 9606
475 6OB1 1 A Ubiquitin 9606
476 6OB1 2 B Ubiquitin 9606
477 6OA9 2 H, J, K Ubiquitin 4932
478 6OAA 3 H Ubiquitin 4932
479 6O96 8 L Polyubiquitin-B 9606
480 6JMA 7 Y Ubiquitin 9606
481 6J99 7 L Ubiquitin 9606
482 6NQA 7 L Ubiquitin 9606
483 6NOG 5 L Ubiquitin 9606
484 6NN6 8 L Ubiquitin 9606
485 6QF8 1 A Polyubiquitin-B 9606
486 6NJ9 5 L Ubiquitin 9606
487 6N13 2 D ubiquitin 9606
488 6N13 4 A phosphoubiquitin 9606
489 6MSB 19 u, w Ubiquitin 9606
490 6MSD 19 u, w Ubiquitin 9606
491 6MSE 19 u Ubiquitin 9606
492 6MSG 19 u Ubiquitin 9606
493 6FTX 8 N, O Polyubiquitin-B 9606
494 5ZD0 1 A ubiquitin 9606
495 5YMY 1 A Ubiquitin 9606
496 5YMY 2 B Ubiquitin 9606
497 5VZM 1 A Ubiquitin UNP residues 1-76 9606
498 5XK4 1 A Polyubiquitin-B UNP residues 1-76 9606
499 5XK5 1 A Polyubiquitin-B UNP residues 1-76 9606
500 5VEY 2 B Polyubiquitin-B 9606
501 5VF0 1 A Polyubiquitin-B 9606
502 5XBO 1 A Polyubiquitin-B UNP residues 1-76 9606
503 5UJL 1 A, B Ubiquitin residues 1-76 9606
504 5UJN 1 A, B Ubiquitin 9606
505 5GJQ 34 y Polyubiquitin-B UNP RESIDUES 1-76 9606
506 5KGF 8 M, O Ubiquitin 9606
507 2NBD 1 A entity 9606
508 2NBE 1 A entity 9606
509 5A5B 9 9 UBIQUITIN ALDEHYDE 9606
510 2N3U 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
511 2N3V 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
512 2N3W 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
513 2N2K 1 A ubiquitin 9606
514 2N2K 2 B ubiquitin 9606
515 2N13 2 B Ubiquitin 9606
516 2N13 3 C Ubiquitin 9606
517 2MWS 1 A Ubiquitin UNP residues 1-76 9606
518 2MUR 2 B Ubiquitin 9606
519 2MSG 1 A Ubiquitin UNP residuse 1-72 9606
520 2MRO 1 A Polyubiquitin-B Human Ubiquitin 9606
521 2MRE 1 A Polyubiquitin-C unp residues 1-76 9606
522 2MOR 1 A Ubiquitin UNP residues 1-76 9606
523 2MJB 1 A Ubiquitin-60S ribosomal protein L40 Ubiquitin-like 3 domain 9606
524 2MJ5 1 A Polyubiquitin-C UNP residuses 1-76 9606
525 2MI8 1 A Ubiquitin 9606
526 2RU6 1 A Ubiquitin 9606
527 2MCN 2 B Ubiquitin UNP residues 1-76 9606
528 2MBQ 1 A, B Ubiquitin UNP residues 1-76 9606
529 2MBO 1 A, B Ubiquitin UNP residues 1-76 9606
530 2MBH 2 A Ubiquitin 9606
531 2MBB 2 B Polyubiquitin-B UNP P0CG47 residues 1-76 9606
532 2M0X 1 A engineered ubiquitin variant 9606
533 2LZ6 1 A Ubiquitin 9606
534 2LVO 1 A Ubiquitin 9606
535 2LVP 1 A, B Ubiquitin 9606
536 2LVQ 1 A, B Ubiquitin 9606
537 2RSU 1 A Ubiquitin 9606
538 2LJ5 1 A Ubiquitin 9606
539 2LD9 1 A Ubiquitin 9606
540 2L3Z 1 A Ubiquitin UNP Residues 1-76 9606
541 2L0T 1 A Ubiquitin 9606
542 2L0F 1 A Ubiquitin 9606
543 2L00 2 B Ubiquitin ubiquitin core domain 4932
544 2RR9 1 A, B ubiquitin 9606
545 2KWV 2 B Ubiquitin 9606
546 2KWU 2 B Ubiquitin 9606
547 2KTF 1 A Ubiquitin 9606
548 2KOX 1 A Ubiquitin 9606
549 2KN5 1 A Ubiquitin 9606
550 2KLG 1 A Ubiquitin 9606
551 2KJH 2 B Ubiquitin 9606
552 2KHW 2 B Ubiquitin 9606
553 2KDE 2 B, C Ubiquitin 8355
554 2KDF 2 B, C Ubiquitin 9606
555 2K8B 1 A Ubiquitin 9606
556 2K8C 1 A Ubiquitin 9606
557 2K6D 2 B Ubiquitin ubiquitin 9606
558 2K39 1 A Ubiquitin 8355
559 2JZZ 1 A Ubiquitin 9606
560 2JY6 1 A Ubiquitin protein 9606
561 2JWZ 1 A Ubiquitin 4932
562 2JVC 1 A ubiquitin_like protein
563 2JT4 2 B Ubiquitin SH3 domain sequence database residues 350-420 4932
564 2Z59 2 B Ubiquitin 9606
565 2JRI 2 B, C UBC protein sequence database residues 318-469 9606
566 2PE9 1 A, B Ubiquitin 9606
567 2PEA 1 A, B Ubiquitin 9606
568 2NR2 1 A Ubiquitin 9606
569 2G3Q 2 B Ubiquitin 4932
570 2DEN 2 B Polyubiquitin-B 9606
571 2FUH 2 B Ubiquitin Ubiquitin 10116
572 1ZW7 1 A Ubiquitin 4932
573 1ZGU 2 B Ubiquitin 9606
574 2BGF 1 A, B DI-UBIQUITIN ISOPEPTIDE BOND BETWEEN GLY76A AND LYS48B 9606
575 1XQQ 1 A ubiquitin 9606
576 1WR1 1 A Ubiquitin 4932
577 1V80 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
578 1V81 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
579 1Q5W 2 B Ubiquitin 9606
580 1Q0W 2 B Ubiquitin 4932
581 1OTR 2 B Ubiquitin 4932
582 1G6J 1 A UBIQUITIN 9606
583 1FXT 2 B UBIQUITIN 9606
584 1D3Z 1 A PROTEIN (UBIQUITIN) 9606
585 1C3T 1 A PROTEIN (1D8 UBIQUITIN) 9606
586 1UD7 1 A PROTEIN (UBIQUITIN CORE MUTANT 1D7) 9606