6PV8

Human alpha3beta4 nicotinic acetylcholine receptor in complex with AT-1001


Sequence Similarity Clusters for the Entities in PDB 6PV8

Entity #1 | Chains: A,D
Fusion protein of Neuronal acetylcholine receptor subunit alpha-3 and Soluble cytochrome b562 protein, length: 525 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21408
95 % 2 2 19994
90 % 2 2 19559
70 % 2 2 18131
50 % 5 6 5651
40 % 8 33 1057
30 % 9 42 888
Entity #2 | Chains: B,C,E
Fusion protein of Neuronal acetylcholine receptor subunit beta-4 and Soluble cytochrome b562 protein, length: 538 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 14241
95 % 2 2 14168
90 % 2 2 13995
70 % 2 2 13230
50 % 6 6 5651
40 % 9 33 1057
30 % 10 42 888
Entity #3 | Chains: F,H
IgG2b Fab heavy chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26155
95 % 2 2 26599
90 % 2 2 25492
70 % 2951 3113 1
50 % 6139 6502 1
40 % 6141 6506 1
30 % 6182 6553 1
Entity #4 | Chains: G,I
Kappa Fab light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21409
95 % 22 31 1288
90 % 141 156 159
70 % 2378 2518 2
50 % 6140 6502 1
40 % 6142 6506 1
30 % 6183 6553 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures