6QM7

Leishmania tarentolae proteasome 20S subunit complexed with GSK3494245


Sequence Similarity Clusters for the Entities in PDB 6QM7

Entity #1 | Chains: A,O
Proteasome alpha1 chain protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 30008
95 % 1 2 24532
90 % 1 2 23739
70 % 1 2 21717
50 % 1 2 19160
40 % 307 370 59
30 % 1886 2291 2
Entity #10 | Chains: J,X
Proteasome beta3 chain protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 29198
95 % 1 2 21597
90 % 1 2 21040
70 % 1 2 20783
50 % 1 2 17280
40 % 307 366 62
30 % 307 366 66
Entity #11 | Chains: K,Y
Proteasome beta4 chain protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26344
95 % 1 2 26713
90 % 1 2 22663
70 % 1 2 20781
50 % 1 2 17279
40 % 1 2 15964
30 % 306 365 68
Entity #12 | Chains: L,Z
Proteasome beta5 chain protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27935
95 % 1 2 21596
90 % 1 2 21039
70 % 1 2 19382
50 % 1 2 17278
40 % 1 2 15963
30 % 1 2 14484
Entity #13 | Chains: M,a
Proteasome beta6 chain protein, length: 339 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 21768
95 % 1 2 20339
90 % 1 2 19847
70 % 1 2 18379
50 % 1 2 16452
40 % 1 2 15233
30 % 1 2 13836
Entity #14 | Chains: N,b
Proteasome beta7 chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 21767
95 % 1 2 20338
90 % 1 2 19846
70 % 1 2 18378
50 % 1 2 16451
40 % 22 32 1119
30 % 22 32 1173
Entity #2 | Chains: B,P
Proteasome alpha2 chain protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27003
95 % 1 2 20300
90 % 1 2 19810
70 % 1 2 18348
50 % 1 2 16423
40 % 307 369 58
30 % 1887 2291 2
Entity #3 | Chains: C,Q
Proteasome alpha3 chain protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 30009
95 % 1 2 24533
90 % 1 2 23740
70 % 1 2 21718
50 % 1 2 19161
40 % 307 369 60
30 % 1888 2291 2
Entity #4 | Chains: D,R
Proteasome alpha4 chain protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27002
95 % 1 2 20299
90 % 1 2 19809
70 % 1 2 18347
50 % 307 366 47
40 % 318 396 21
30 % 1889 2291 2
Entity #5 | Chains: E,S
Proteasome alpha5 chain protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27001
95 % 1 2 23356
90 % 1 2 19808
70 % 1 2 20753
50 % 1 2 16422
40 % 1 2 15207
30 % 1 2 13817
Entity #6 | Chains: F,T
Proteasome alpha6 chain protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 30007
95 % 1 2 24531
90 % 1 2 23738
70 % 1 2 21716
50 % 1 2 19619
40 % 1 2 17606
30 % 1 2 15867
Entity #7 | Chains: G,U
Proteasome alpha7 chain protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27000
95 % 1 2 23355
90 % 1 2 19807
70 % 1 2 20752
50 % 1 2 18401
40 % 62 102 339
30 % 1890 2291 2
Entity #8 | Chains: H,V
Proteasome beta1 chain protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26999
95 % 1 2 23353
90 % 1 2 19806
70 % 1 2 18345
50 % 1 2 16421
40 % 1 2 15206
30 % 1 2 13816
Entity #9 | Chains: I,W
Proteasome beta2 chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26998
95 % 1 2 20297
90 % 1 2 19805
70 % 1 2 18344
50 % 4 26 1775
40 % 4 26 1825
30 % 4 26 1855

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures