Sequence Similarity Clusters for the Entities in PDB 6QM7

Entity #1 | Chains: A,O
Proteasome alpha1 chain protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26244
95 % 1 2 22796
90 % 1 2 22127
70 % 1 2 20337
50 % 1 2 18036
40 % 304 367 41
30 % 1868 2273 2
Entity #10 | Chains: J,X
Proteasome beta3 chain protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20608
95 % 1 2 18941
90 % 1 2 18546
70 % 1 2 17227
50 % 1 2 15480
40 % 304 363 44
30 % 304 363 46
Entity #11 | Chains: K,Y
Proteasome beta4 chain protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 29296
95 % 1 2 24938
90 % 1 2 24129
70 % 1 2 18127
50 % 1 2 16205
40 % 1 2 17824
30 % 303 362 47
Entity #12 | Chains: L,Z
Proteasome beta5 chain protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22227
95 % 1 2 20057
90 % 1 2 19583
70 % 1 2 18126
50 % 1 2 16204
40 % 1 2 15014
30 % 1 2 13607
Entity #13 | Chains: M,a
Proteasome beta6 chain protein, length: 339 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22226
95 % 1 2 20056
90 % 1 2 19582
70 % 1 2 18125
50 % 1 2 16203
40 % 1 2 15013
30 % 1 2 13606
Entity #14 | Chains: N,b
Proteasome beta7 chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24931
95 % 1 2 18940
90 % 1 2 18545
70 % 1 2 17226
50 % 1 2 15479
40 % 21 31 1026
30 % 21 31 1069
Entity #2 | Chains: B,P
Proteasome alpha2 chain protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26245
95 % 1 2 22797
90 % 1 2 22128
70 % 1 2 20338
50 % 1 2 18037
40 % 304 366 40
30 % 1869 2273 2
Entity #3 | Chains: C,Q
Proteasome alpha3 chain protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20567
95 % 1 2 18903
90 % 1 2 18514
70 % 1 2 17196
50 % 1 2 15451
40 % 304 366 42
30 % 1870 2273 2
Entity #4 | Chains: D,R
Proteasome alpha4 chain protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20566
95 % 1 2 18902
90 % 1 2 18513
70 % 1 2 17195
50 % 304 363 36
40 % 315 393 17
30 % 1871 2273 2
Entity #5 | Chains: E,S
Proteasome alpha5 chain protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24666
95 % 1 2 18901
90 % 1 2 18512
70 % 1 2 17194
50 % 1 2 15450
40 % 1 2 14348
30 % 1 2 13030
Entity #6 | Chains: F,T
Proteasome alpha6 chain protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20565
95 % 1 2 22931
90 % 1 2 21077
70 % 1 2 20433
50 % 1 2 17285
40 % 1 2 15946
30 % 1 2 13029
Entity #7 | Chains: G,U
Proteasome alpha7 chain protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24665
95 % 1 2 18900
90 % 1 2 21076
70 % 1 2 17193
50 % 1 2 15449
40 % 59 99 312
30 % 1872 2273 2
Entity #8 | Chains: H,V
Proteasome beta1 chain protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 28379
95 % 1 2 18899
90 % 1 2 18511
70 % 1 2 17192
50 % 1 2 15448
40 % 1 2 14347
30 % 1 2 13028
Entity #9 | Chains: I,W
Proteasome beta2 chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26243
95 % 1 2 22795
90 % 1 2 22126
70 % 1 2 20336
50 % 2 24 1813
40 % 2 24 1861
30 % 2 24 1888

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures