The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].
To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment  is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser .
Currently viewing only significant results (P-value < 0.001). Show all available results.
Cluster data are up-to-date as of: Sep-27-2017
The table is sorting is by P-value by default. Clicking on the column header will change the sort order. Select the Filter Results icon to apply other filtering criteria.
A detailed description of the procedure for the all vs. all alignments is available.
You can also use the structure comparison tool to compare any 2 given structures
Description: Polymerase 3 protein |
represented by chain XXXX.null
which has more than 50% sequence identity.
View how chain 6ABD.A compares with the representative chain xxxx. Select a comparison method:
Description: RNA-directed RNA polymerase catalytic subunit protein |
represented by chain 4WRT.B
which has more than 40% sequence identity.
View how chain 6ABD.B compares with the representative chain PDP:4WRTBa. Select a comparison method:
Description: Polymerase PB2 protein |
View how chain 6ABD.C compares with the representative chain xxxx. Select a comparison method:
Description: RNA (5'-R(P*CP*UP*CP*CP*UP*GP*CP*UP*UP*AP*UP*GP*CP*U)-3') rna |
This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.
Description: RNA (5'-R(P*AP*GP*CP*AP*GP*UP*AP*GP*CP*AP*AP*GP*GP*AP*G)-3') rna |
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