Structural Similarities for the Entities in PDB 6IAP

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A

Description: Natural cytotoxicity triggering receptor 1 protein | Length: 182

No structure alignment results are available for 6IAP.A explicitly.

It is represented by chain 3P2T.A which has more than 40% sequence identity.

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Entity #2 | Chains D

Description: Fab NKp46-4 light chain protein | Length: 211

No structure alignment results are available for 6IAP.D explicitly.

It is represented by chain 4NZU.L which has more than 90% sequence identity.

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Entity #3 | Chains E

Description: Fab NKp46-4 heavy chain protein | Length: 217

No structure alignment results are available for 6IAP.E explicitly.

It is represented by chain XXXX.null which has more than 70% sequence identity.

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Entity #4 | Chains H

Description: Fab NKp46-1 heavy chain protein | Length: 220

No structure alignment results are available for 6IAP.H explicitly.

It is represented by chain XXXX.null which has more than 70% sequence identity.

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Entity #5 | Chains L

Description: Fab NKp46-1 light chain protein | Length: 211

No structure alignment results are available for 6IAP.L explicitly.

It is represented by chain 4NZU.L which has more than 90% sequence identity.

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References