6IP4

Crystal structure of Arabidopsis thaliana JMJ13 catalytic domain in complex with NOG and an H3K27me3 peptide


Structural Similarities for the Entities in PDB 6IP4

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A

Description: Arabidopsis JMJ13 protein | Length: 490

No structure alignment results are available for 6IP4.A explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

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View how chain 6IP4.A compares with the representative chain xxxx. Select a comparison method:


Entity #2 | Chains B

Description: Histone H3.2 protein | Length: 12

This entity is too short to be considered for the all vs. all structure alignments.


References