6PV8

Human alpha3beta4 nicotinic acetylcholine receptor in complex with AT-1001


Structural Similarities for the Entities in PDB 6PV8

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,D

Description: Fusion protein of Neuronal acetylcholine receptor subunit alpha-3 and Soluble cytochrome b562 protein | Length: 525

No structure alignment results are available for 6PV8.A, 6PV8.D explicitly.

These chains are represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 6PV8.D compares with the representative chain xxxx. Select a comparison method:


Entity #2 | Chains B,C,E

Description: Fusion protein of Neuronal acetylcholine receptor subunit beta-4 and Soluble cytochrome b562 protein | Length: 538

No structure alignment results are available for 6PV8.B, 6PV8.C, 6PV8.E explicitly.

These chains are represented by chain XXXX.null which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 6PV8.E compares with the representative chain xxxx. Select a comparison method:


Entity #3 | Chains F,H

Description: IgG2b Fab heavy chain protein | Length: 219

No structure alignment results are available for 6PV8.F, 6PV8.H explicitly.

These chains are represented by chain XXXX.null which has more than 70% sequence identity.

Show structure comparison results

  Loading...

View how chain 6PV8.H compares with the representative chain xxxx. Select a comparison method:


Entity #4 | Chains G,I

Description: Kappa Fab light chain protein | Length: 213

No structure alignment results are available for 6PV8.G, 6PV8.I explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

Show structure comparison results

  Loading...

View how chain 6PV8.I compares with the representative chain PDP:4NZULa. Select a comparison method:


References