Human Brr2 Helicase Region in complex with C-tail deleted Jab1

Structural Similarities for the Entities in PDB 6S8Q

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains B

Description: U5 small nuclear ribonucleoprotein 200 kDa helicase protein | Length: 1747


Entity #2 | Chains J

Description: Pre-mRNA-processing-splicing factor 8 protein | Length: 263

No structure alignment results are available for 6S8Q.J explicitly.

It is represented by chain 2OG4.A which has more than 40% sequence identity.

Show structure comparison results


View how chain 6S8Q.J compares with the representative chain PDP:2OG4Aa. Select a comparison method: