AATF - apoptosis antagonizing transcription factor

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9NY61 HGNC Approved Gene Symbol: AATF 
Ensembl ENSG00000275700 
Synonyms : DED, CHE-1, CHE1, BFR2
HgncId : HGNC:19235  Omim: 608463 
Refseq: NM_012138  GenBank: AF083208 
 
Genomic coordinates: Cytogenetic location: 17q12 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

AATF Gene Structure

Chromosome: chr17
Genbank ID: NM_012138 Orientation: +
Length coding sequence : 1680 nucleotides.
Regionstartendregion lengthphase at end
UTR35,306,17435,306,425
Exon35,306,42635,306,516911
Exon35,307,51435,307,7051921
Exon35,310,18635,310,5964111
Exon35,311,07035,311,2071381
Exon35,343,91635,344,0301152
Exon35,345,81835,346,0192020
Exon35,346,54635,346,7101650
Exon35,348,07335,348,156840
Exon35,376,30435,376,371682
Exon35,378,23335,378,313812
Exon35,388,91135,388,982722
Exon35,413,90135,413,964640
UTR35,413,96535,414,171