AFF4 - AF4/FMR2 family member 4

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9UHB7 HGNC Approved Gene Symbol: AFF4 
Ensembl ENSG00000072364 
Synonyms : AF5Q31, MCEF Previous Names: "AF4/FMR2 family, member 4"
HgncId : HGNC:17869  Omim: 604417 
Refseq: NM_014423  GenBank: AF197927 
 
Genomic coordinates: Cytogenetic location: 5q31.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

AFF4 Gene Structure

Chromosome: chr5
Genbank ID: NM_014423 Orientation: -
Length coding sequence : 3489 nucleotides.
Regionstartendregion lengthphase at end
UTR132,298,950132,299,354
UTR
132,272,882132,272,885
Exon132,272,759132,272,8811230
Exon132,269,839132,270,6337950
Exon132,267,870132,267,914450
Exon132,262,813132,262,899870
Exon132,240,060132,240,096371
Exon132,238,134132,238,179462
Exon132,235,279132,235,333550
Exon132,234,796132,234,833382
Exon132,233,922132,234,0841630
Exon132,232,015132,232,9329180
Exon132,228,722132,228,810892
Exon132,227,856132,228,0962410
Exon132,224,771132,224,865952
Exon132,223,789132,223,852640
Exon132,223,538132,223,6741372
Exon132,223,213132,223,284722
Exon132,222,002132,222,095940
Exon132,220,768132,220,811442
Exon132,219,032132,219,2522211
Exon132,216,751132,216,8781280
UTR
132,211,071132,216,750