AFTPH - aftiphilin

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

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Cross References
UniProt: Q6ULP2 HGNC Approved Gene Symbol: AFTPH 
Ensembl ENSG00000119844 
Synonyms : MGC33965, FLJ20080, FLJ23793, Nbla10388
HgncId : HGNC:25951 
Refseq: NM_017657  GenBank: AB073356 
 
Genomic coordinates: Cytogenetic location: 2p14 reset view
Currently highlighted: Genomic position: chr2:64,800,080 View in genomic position mapping tool
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

AFTPH Gene Structure

Chromosome: chr2
Genbank ID: NM_017657 Orientation: +
Length coding sequence : 2727 nucleotides.
Regionstartendregion lengthphase at end
UTR64,778,57664,778,608
Exon64,778,60964,780,54319350
Exon64,794,69664,794,8471522
Exon64,796,22664,796,3521270
Exon64,796,75764,796,813570
Exon64,800,08064,800,2021230
Exon64,806,62064,806,680611
Exon64,812,55664,812,6791242
Exon64,819,01964,819,1691510
UTR64,819,17064,820,138