AQR - aquarius intron-binding spliceosomal factor

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 11 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O60306 HGNC Approved Gene Symbol: AQR 
Ensembl ENSG00000021776 
Synonyms : KIAA0560, fSAP164, IBP160 Previous Names: "aquarius homolog (mouse)"
HgncId : HGNC:29513  Omim: 610548 
Refseq: NM_014691  GenBank: AB011132 
 
Genomic coordinates: Cytogenetic location: 15q14 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

AQR Gene Structure

Chromosome: chr15
Genbank ID: NM_014691 Orientation: -
Length coding sequence : 4455 nucleotides.
Regionstartendregion lengthphase at end
UTR
35,261,81535,261,995
Exon35,261,74035,261,814750
Exon35,256,43535,256,491570
Exon35,252,97535,253,015412
Exon35,245,08635,245,121362
Exon35,240,46535,240,5851210
Exon35,236,48935,236,6291410
Exon35,234,21335,234,281690
Exon35,233,10035,233,2001012
Exon35,230,93835,231,014771
Exon35,226,77235,226,836650
Exon35,224,51935,224,6351170
Exon35,222,45935,222,5721140
Exon35,219,23635,219,3391042
Exon35,212,53335,212,6351030
Exon35,210,45935,210,5791211
Exon35,207,23935,207,3801422
Exon35,202,33635,202,5141791
Exon35,198,74635,198,9131681
Exon35,196,53735,196,7061700
Exon35,192,82335,193,0642422
Exon35,189,76035,189,9061472
Exon35,189,09835,189,167700
Exon35,185,86435,185,9741110
Exon35,182,41635,182,5251102
Exon35,178,72735,178,8621360
Exon35,176,72635,176,9352100
Exon35,174,70335,174,8401380
Exon35,168,13635,168,207720
Exon35,166,87835,167,0651882
Exon35,166,02935,166,2001720
Exon35,162,95335,163,1231710
Exon35,159,72535,159,810862
Exon35,155,06835,155,2421750
Exon35,152,24335,152,3561140
Exon35,148,99335,149,3073150
UTR
35,148,55235,148,992