BHLHE40 - basic helix-loop-helix family member e40

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: no matching PDB entities View list of all current human gene IDs
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Cross References
UniProt: O14503 HGNC Approved Gene Symbol: BHLHE40 
Previous Symbols: STRA13, BHLHB2 Ensembl ENSG00000134107 
Synonyms : DEC1, bHLHe40, SHARP2, Clast5 Previous Names: "basic helix-loop-helix domain containing, class B, 2", "basic helix-loop-helix family, member e40"
HgncId : HGNC:1046  Omim: 604256 
Refseq: NM_003670  GenBank: AB004066 
 
Genomic coordinates: Cytogenetic location: 3p26.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

BHLHE40 Gene Structure

Chromosome: chr3
Genbank ID: NM_003670 Orientation: +
Length coding sequence : 1236 nucleotides.
Regionstartendregion lengthphase at end
UTR5,021,0965,021,403
Exon5,021,4045,021,483802
Exon5,021,6475,021,716700
Exon5,021,9865,022,0931080
Exon5,023,0775,023,2001241
Exon5,024,5215,025,3778570
UTR5,025,3785,026,865