CCDC47 - coiled-coil domain containing 47

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for CCDC47 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q96A33 HGNC Approved Gene Symbol: CCDC47 
Ensembl ENSG00000108588 
Synonyms : GK001
HgncId : HGNC:24856 
Refseq: NM_020198  GenBank: AF226054 
 
Genomic coordinates: Cytogenetic location: 17q23.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CCDC47 Gene Structure

Chromosome: chr17
Genbank ID: NM_020198 Orientation: -
Length coding sequence : 1449 nucleotides.
Regionstartendregion lengthphase at end
UTR61,850,77161,851,088
UTR
61,843,53661,843,554
Exon61,843,27261,843,5352640
Exon61,842,10061,842,2071080
Exon61,841,37661,841,5501751
Exon61,838,59061,838,7111220
Exon61,838,27461,838,339660
Exon61,833,82961,833,9301020
Exon61,833,60061,833,7101110
Exon61,831,79361,831,878862
Exon61,830,10161,830,159591
Exon61,829,68061,829,7891100
Exon61,829,30061,829,4671680
Exon61,824,24161,824,321810
UTR
61,822,61061,824,240