CDC5L - cell division cycle 5 like

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 14 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q99459 HGNC Approved Gene Symbol: CDC5L 
Ensembl ENSG00000096401 
Synonyms : PCDC5RP, hCDC5, CEF1, CDC5 Previous Names: "CDC5 (cell division cycle 5, S. pombe, homolog)-like", "CDC5 cell division cycle 5-like (S. pombe)", "cell division cycle 5-like"
HgncId : HGNC:1743  Omim: 602868 
GenBank: D85423 
 
Genomic coordinates: Cytogenetic location: 6p21.1 reset view
Currently highlighted: Genomic position: chr6:44,414,448 View in genomic position mapping tool
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CDC5L Gene Structure

Chromosome: chr6
Genbank ID: NM_001253 Orientation: +
Length coding sequence : 2406 nucleotides.
Regionstartendregion lengthphase at end
UTR44,355,25044,355,560
Exon44,355,56144,355,605450
Exon44,358,00544,358,1081042
Exon44,360,40444,360,5651622
Exon44,361,18344,361,3101281
Exon44,364,07844,364,1771002
Exon44,371,54644,371,7642192
Exon44,374,06044,374,2041450
Exon44,376,18144,376,3691890
Exon44,387,18644,387,3341492
Exon44,390,38444,390,5461630
Exon44,392,15644,392,3201650
Exon44,393,84044,393,920810
Exon44,394,21944,394,4612430
Exon44,397,45044,397,6471980
Exon44,413,39244,413,6042130
Exon44,414,34444,414,4481050
UTR44,414,44944,418,161