CPSF3 - cleavage and polyadenylation specific factor 3

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 4 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9UKF6 HGNC Approved Gene Symbol: CPSF3 
Ensembl ENSG00000119203 
Synonyms : CPSF-73, CPSF73, YSH1 Previous Names: "cleavage and polyadenylation specific factor 3, 73kD subunit", "cleavage and polyadenylation specific factor 3, 73kDa"
HgncId : HGNC:2326  Omim: 606029 
Refseq: NM_016207  GenBank: AF171877 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CPSF3 Gene Structure

Chromosome: chr2
Genbank ID: NM_016207 Orientation: +
Length coding sequence : 2052 nucleotides.
Regionstartendregion lengthphase at end
UTR9,563,6659,563,902
Exon9,563,9039,563,952502
Exon9,568,8949,568,957640
Exon9,570,0529,570,149982
Exon9,570,8819,571,0091292
Exon9,572,6409,572,8171780
Exon9,574,0009,574,089900
Exon9,576,3409,576,4901511
Exon9,580,6209,580,7951760
Exon9,581,9479,582,1051590
Exon9,583,6449,583,7901470
Exon9,588,3279,588,4791530
Exon9,593,0429,593,1501091
Exon9,595,7889,595,886991
Exon9,597,0629,597,156950
Exon9,599,6609,599,747881
Exon9,607,8369,607,905702
Exon9,611,4729,611,568970
Exon9,613,0459,613,1461020
UTR9,613,1479,613,239