CX3CL1 - C-X3-C motif chemokine ligand 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for CX3CL1 View list of all current human gene IDs
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Cross References
UniProt: P78423 HGNC Approved Gene Symbol: CX3CL1 
Previous Symbols: SCYD1 Ensembl ENSG00000006210 
Synonyms : NTN, C3Xkine, ABCD-3, CXC3C, CXC3, fractalkine, neurotactin Previous Names: "small inducible cytokine subfamily D (Cys-X3-Cys), member 1 (fractalkine, neurotactin)", "chemokine (C-X3-C motif) ligand 1"
HgncId : HGNC:10647  Omim: 601880 
Refseq: NM_002996  GenBank: U84487 
 
Genomic coordinates: Cytogenetic location: 16q21 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CX3CL1 Gene Structure

Chromosome: chr16
Genbank ID: NM_002996 Orientation: +
Length coding sequence : 1191 nucleotides.
Regionstartendregion lengthphase at end
UTR57,406,37257,406,480
Exon57,406,48157,406,550701
Exon57,413,54657,413,6661212
Exon57,415,94257,416,94410030
UTR57,416,94557,418,960