DCX - doublecortin

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for DCX View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O43602 HGNC Approved Gene Symbol: DCX 
Ensembl ENSG00000077279 
Synonyms : SCLH, DC, LISX, DBCN, XLIS Previous Names: "doublecortex; lissencephaly, X-linked (doublecortin)"
HgncId : HGNC:2714  Omim: 300121 
Refseq: NM_178153  GenBank: AF040254 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DCX Gene Structure

Chromosome: chrX
Genbank ID: NM_178153 Orientation: -
Length coding sequence : 1080 nucleotides.
Regionstartendregion lengthphase at end
UTR110,655,365110,655,460
UTR
110,653,627110,653,648
Exon110,653,263110,653,6263641
Exon110,644,218110,644,5583410
Exon110,576,279110,576,3811031
Exon110,574,147110,574,2691231
Exon110,555,870110,555,964950
Exon110,544,915110,544,971570
UTR
110,537,007110,544,914

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