DDX1 - DEAD-box helicase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q92499 HGNC Approved Gene Symbol: DDX1 
Ensembl ENSG00000079785 
Synonyms : DBP-RB Previous Names: "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 1", "DEAD (Asp-Glu-Ala-Asp) box polypeptide 1", "DEAD (Asp-Glu-Ala-Asp) box helicase 1"
HgncId : HGNC:2734  Omim: 601257 
Refseq: NM_004939  GenBank: X70649 
 
Genomic coordinates: Cytogenetic location: 2p24.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DDX1 Gene Structure

Chromosome: chr2
Genbank ID: NM_004939 Orientation: +
Length coding sequence : 2220 nucleotides.
Regionstartendregion lengthphase at end
UTR15,731,74415,732,057
Exon15,732,05815,732,073161
Exon15,735,26915,735,320522
Exon15,735,61415,735,677640
Exon15,736,85815,736,887300
Exon15,737,49915,737,595971
Exon15,739,79315,739,840481
Exon15,742,67215,742,755841
Exon15,743,31615,743,399841
Exon15,743,93815,744,014770
Exon15,744,56115,744,633731
Exon15,746,07415,746,150770
Exon15,746,27415,746,3881151
Exon15,747,29915,747,4371392
Exon15,753,34815,753,408610
Exon15,757,36815,757,466990
Exon15,758,30515,758,394900
Exon15,760,33215,760,5201890
Exon15,761,18915,761,240521
Exon15,763,56015,763,7061471
Exon15,767,17815,767,269920
Exon15,768,56915,768,641731
Exon15,768,76215,768,834732
Exon15,768,92115,768,963430
Exon15,769,72615,769,821960
Exon15,770,11415,770,2341211
Exon15,770,90015,771,0301310
UTR15,771,03115,771,235