DDX42 - DEAD-box helicase 42

 

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Cross References
UniProt: Q86XP3 HGNC Approved Gene Symbol: DDX42 
Ensembl ENSG00000198231 
Synonyms : RNAHP, RHELP, SF3b125, SF3B8 Previous Names: "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42", "DEAD (Asp-Glu-Ala-Asp) box helicase 42"
HgncId : HGNC:18676  Omim: 613369 
Refseq: NM_007372  GenBank: BC015505 
 
Genomic coordinates: Cytogenetic location: 17q23.3 reset view
Currently highlighted: Genomic position: chr17:61,889,292 View in genomic position mapping tool
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The genome browser is based on Biodalliance browser  
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Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DDX42 Gene Structure

Chromosome: chr17
Genbank ID: NM_007372 Orientation: +
Length coding sequence : 2814 nucleotides.
Regionstartendregion lengthphase at end
UTR61,864,39361,864,409
Exon61,864,41061,864,6302212
Exon61,869,77261,869,9221510
Exon61,875,39861,875,459622
Exon61,876,94961,876,985370
Exon61,877,82861,877,9771500
Exon61,882,43161,882,5351050
Exon61,883,89561,884,0141200
Exon61,885,08461,885,2601770
Exon61,886,18061,886,3081290
Exon61,886,92061,887,0191001
Exon61,887,87361,887,920481
Exon61,888,43661,888,533980
Exon61,889,29261,889,5682771
Exon61,890,58861,890,8142270
Exon61,892,92361,893,0331110
Exon61,894,22861,894,326990
Exon61,895,05461,895,7587050
UTR61,895,75961,896,677