DEAF1 - DEAF1, transcription factor

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for DEAF1 View list of all current human gene IDs
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Cross References
UniProt: O75398 HGNC Approved Gene Symbol: DEAF1 
Ensembl ENSG00000177030 
Synonyms : NUDR, SPN, ZMYND5 Previous Names: "deformed epidermal autoregulatory factor 1 (Drosophila)"
HgncId : HGNC:14677  Omim: 602635 
Refseq: NM_021008  GenBank: AF049460 
 
Genomic coordinates: Cytogenetic location: 11p15.5 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DEAF1 Gene Structure

Chromosome: chr11
Genbank ID: NM_021008 Orientation: -
Length coding sequence : 1695 nucleotides.
Regionstartendregion lengthphase at end
UTR
695,048695,754
Exon694,759695,0472891
Exon691,501691,598980
Exon688,331688,4601301
Exon687,911688,0571471
Exon686,858686,9971400
Exon684,898684,963660
Exon680,963681,0891271
Exon679,688679,8161291
Exon678,694678,8221291
Exon674,536674,7832480
Exon653,962654,051900
Exon644,550644,6541050
UTR
644,220644,549