FAT1 - FAT atypical cadherin 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: no matching PDB entities View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q14517 HGNC Approved Gene Symbol: FAT1 
Previous Symbols: FAT Ensembl ENSG00000083857 
Synonyms : CDHF7, CDHR8 Previous Names: "FAT tumor suppressor (Drosophila) homolog", "FAT tumor suppressor homolog 1 (Drosophila)"
HgncId : HGNC:3595  Omim: 600976 
Refseq: NM_005245  GenBank: X87241 
 
Genomic coordinates: Cytogenetic location: 4q35.2 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

FAT1 Gene Structure

Chromosome: chr4
Genbank ID: NM_005245 Orientation: -
Length coding sequence : 13764 nucleotides.
Regionstartendregion lengthphase at end
UTR187,644,817187,644,987
UTR
187,630,982187,630,999
Exon187,627,717187,630,98132651
Exon187,584,453187,584,7673151
Exon187,560,876187,560,937620
Exon187,557,739187,558,0683300
Exon187,557,179187,557,3892111
Exon187,554,838187,554,9771400
Exon187,549,642187,549,9172760
Exon187,549,308187,549,5182111
Exon187,538,862187,542,92940681
Exon187,538,159187,538,3551970
Exon187,535,345187,535,4981541
Exon187,534,263187,534,4962341
Exon187,532,540187,532,9293901
Exon187,530,955187,531,1692150
Exon187,530,337187,530,4741380
Exon187,527,224187,527,3671440
Exon187,525,531187,525,7281980
Exon187,524,330187,525,1318021
Exon187,524,057187,524,1881321
Exon187,522,423187,522,5801580
Exon187,521,052187,521,5144631
Exon187,519,126187,519,2791542
Exon187,518,836187,518,9461112
Exon187,517,694187,518,3256321
Exon187,516,843187,516,9801381
Exon187,509,746187,510,3746290
UTR
187,508,937187,509,745