HDAC1 - histone deacetylase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for HDAC1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q13547 HGNC Approved Gene Symbol: HDAC1 
Previous Symbols: RPD3L1 Ensembl ENSG00000116478 
Synonyms : HD1, GON-10
HgncId : HGNC:4852  Omim: 601241 
Refseq: NM_004964  GenBank: D50405 
 
Genomic coordinates: Cytogenetic location: 1p35.2-p35.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HDAC1 Gene Structure

Chromosome: chr1
Genbank ID: NM_004964 Orientation: +
Length coding sequence : 1446 nucleotides.
Regionstartendregion lengthphase at end
UTR32,757,70732,757,770
Exon32,757,77132,757,819491
Exon32,768,22232,768,3341130
Exon32,782,26632,782,3831181
Exon32,790,08032,790,154751
Exon32,792,54032,792,6781392
Exon32,793,13732,793,2781420
Exon32,794,66932,794,761930
Exon32,796,17932,796,2871091
Exon32,796,36932,796,5091411
Exon32,797,07532,797,1831092
Exon32,797,27732,797,4071311
Exon32,797,69132,797,8431531
Exon32,798,30232,798,350492
Exon32,798,61832,798,645280
UTR32,798,64632,799,224