ITGA5 - integrin subunit alpha 5

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for ITGA5 View list of all current human gene IDs
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Cross References
UniProt: P08648 HGNC Approved Gene Symbol: ITGA5 
Previous Symbols: FNRA Ensembl ENSG00000161638 
Synonyms : CD49e Previous Names: "integrin, alpha 5 (fibronectin receptor, alpha polypeptide)"
HgncId : HGNC:6141  Omim: 135620 
 
Genomic coordinates: Cytogenetic location: 12q13.13 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

ITGA5 Gene Structure

Chromosome: chr12
Genbank ID: NM_002205 Orientation: -
Length coding sequence : 3147 nucleotides.
Regionstartendregion lengthphase at end
UTR
54,812,98354,813,050
Exon54,812,76554,812,9822182
Exon54,805,61854,805,7481311
Exon54,803,26954,803,3811130
Exon54,803,01654,803,1361211
Exon54,802,67754,802,738620
Exon54,802,54054,802,585461
Exon54,801,89454,802,0191261
Exon54,801,61654,801,660451
Exon54,801,43354,801,476440
Exon54,799,65454,799,710570
Exon54,799,44854,799,500532
Exon54,798,95054,799,1582091
Exon54,798,48754,798,6781921
Exon54,798,21454,798,259462
Exon54,797,92954,798,0301022
Exon54,797,69554,797,750561
Exon54,797,40954,797,5631550
Exon54,796,97154,797,1081380
Exon54,796,76754,796,834682
Exon54,795,96454,796,1141510
Exon54,795,78554,795,877930
Exon54,795,56054,795,639802
Exon54,795,36954,795,449812
Exon54,795,15754,795,2621060
Exon54,794,63054,794,7791500
Exon54,793,64854,793,731840
Exon54,793,42954,793,5421140
Exon54,792,38154,792,4821020
Exon54,791,14954,791,2711230
Exon54,790,07754,790,160840
UTR
54,789,04554,790,076