KDM8 - lysine demethylase 8

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for KDM8 View list of all current human gene IDs
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Cross References
UniProt: Q8N371 HGNC Approved Gene Symbol: KDM8 
Previous Symbols: JMJD5 Ensembl ENSG00000155666 
Synonyms : FLJ13798 Previous Names: "jumonji domain containing 5", "lysine (K)-specific demethylase 8"
HgncId : HGNC:25840  Omim: 611917 
Refseq: NM_024773  GenBank: AK023860 
 
Genomic coordinates: Cytogenetic location: 16p12.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

KDM8 Gene Structure

Chromosome: chr16
Genbank ID: NM_024773 Orientation: +
Length coding sequence : 1248 nucleotides.
Regionstartendregion lengthphase at end
UTR27,221,41327,221,444
Exon27,221,44527,221,9424980
Exon27,224,90627,225,0721672
Exon27,226,19727,226,3291330
Exon27,227,26627,227,310450
Exon27,230,28227,230,4311500
Exon27,231,71427,231,806930
Exon27,231,88727,232,0511650
UTR27,232,05227,233,089