LSM11 - LSM11, U7 small nuclear RNA associated

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for LSM11 View list of all current human gene IDs
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Cross References
UniProt: P83369 HGNC Approved Gene Symbol: LSM11 
Ensembl ENSG00000155858 
Synonyms : FLJ38273 Previous Names: "LSM11 homolog, U7 small nuclear RNA associated (S. cerevisiae)"
HgncId : HGNC:30860 
Refseq: NM_173491  GenBank: AK095592 
 
Genomic coordinates: Cytogenetic location: 5q33.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

LSM11 Gene Structure

Chromosome: chr5
Genbank ID: NM_173491 Orientation: +
Length coding sequence : 1080 nucleotides.
Regionstartendregion lengthphase at end
UTR157,170,702157,170,758
Exon157,170,759157,171,2064481
Exon157,178,398157,178,5371400
Exon157,181,012157,181,095840
Exon157,181,862157,182,2724110
UTR157,182,273157,187,717