PDLIM2 - PDZ and LIM domain 2

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for PDLIM2 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q96JY6 HGNC Approved Gene Symbol: PDLIM2 
Ensembl ENSG00000120913 
HgncId : HGNC:13992  Omim: 609722 
GenBank: AY007729 
 
Genomic coordinates: Cytogenetic location: 8p21.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PDLIM2 Gene Structure

Chromosome: chr8
Genbank ID: NM_021630 Orientation: +
Length coding sequence : 1806 nucleotides.
Regionstartendregion lengthphase at end
UTR22,436,25322,436,292
Exon22,436,29322,437,0407481
Exon22,438,11622,438,210950
Exon22,438,89222,439,0431522
Exon22,442,33422,442,403700
Exon22,442,53022,442,6751462
Exon22,442,83422,442,912790
Exon22,446,81122,446,887772
Exon22,447,10922,447,2541461
Exon22,449,06422,449,1811182
Exon22,451,24622,451,4231780
UTR22,451,42422,451,810