PDPK1 - 3-phosphoinositide dependent protein kinase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for PDPK1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O15530 HGNC Approved Gene Symbol: PDPK1 
Ensembl ENSG00000140992 
Synonyms : PDK1
HgncId : HGNC:8816  Omim: 605213 
GenBank: AF017995 
 
Genomic coordinates: Cytogenetic location: 16p13.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PDPK1 Gene Structure

Chromosome: chr16
Genbank ID: NM_001261816 Orientation: +
Length coding sequence : 1362 nucleotides.
Regionstartendregion lengthphase at end
UTR2,587,9642,588,113
Exon2,588,1142,588,137240
Exon2,607,7042,607,9642610
Exon2,611,4812,611,523431
Exon2,611,7722,611,9091381
Exon2,615,5542,615,6981452
Exon2,616,3572,616,454981
Exon2,627,4262,627,501762
Exon2,631,2962,631,364692
Exon2,631,6082,631,704970
Exon2,633,4132,633,5861740
Exon2,636,6772,636,8942182
Exon2,647,6522,647,673220
UTR2,647,6742,653,191