PER1 - period circadian clock 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

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Cross References
UniProt: O15534 HGNC Approved Gene Symbol: PER1 
Previous Symbols: PER Ensembl ENSG00000179094 
Synonyms : RIGUI Previous Names: "period (Drosophila) homolog 1", "period homolog 1 (Drosophila)"
HgncId : HGNC:8845  Omim: 602260 
GenBank: AB002107 
 
Genomic coordinates: Cytogenetic location: 17p13.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PER1 Gene Structure

Chromosome: chr17
Genbank ID: NM_002616 Orientation: -
Length coding sequence : 3870 nucleotides.
Regionstartendregion lengthphase at end
UTR8,055,6548,055,753
UTR
8,054,0258,054,163
Exon8,053,7508,054,0242752
Exon8,053,5378,053,635992
Exon8,053,2898,053,4431551
Exon8,053,0738,053,1941220
Exon8,052,7808,052,9812021
Exon8,052,5778,052,628522
Exon8,051,9628,052,1041431
Exon8,051,4998,051,577792
Exon8,051,3158,051,4211071
Exon8,050,9928,051,1451542
Exon8,050,7888,050,8961090
Exon8,050,5688,050,6991320
Exon8,050,2158,050,3201061
Exon8,049,9128,050,0831722
Exon8,049,6908,049,8201311
Exon8,049,2768,049,4551801
Exon8,048,0698,048,3112431
Exon8,046,5848,047,1946110
Exon8,045,9678,046,1531871
Exon8,045,5878,045,7761902
Exon8,045,1238,045,2731510
Exon8,044,3868,044,6582730
UTR
8,043,7888,044,385