PLRG1 - pleiotropic regulator 1

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 13 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O43660 HGNC Approved Gene Symbol: PLRG1 
Ensembl ENSG00000171566 
Synonyms : PRL1, Prp46, PRPF46, Cwc1, TANGO4 Previous Names: "pleiotropic regulator 1 (PRL1, Arabidopsis homolog)", "pleiotropic regulator 1 (PRL1 homolog, Arabidopsis)"
HgncId : HGNC:9089  Omim: 605961 
Refseq: NM_002669  GenBank: AF044333 
 
Genomic coordinates: Cytogenetic location: 4q31.3 reset view
Currently highlighted: Genomic position: chr4:155,462,086 View in genomic position mapping tool
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PLRG1 Gene Structure

Chromosome: chr4
Genbank ID: NM_002669 Orientation: -
Length coding sequence : 1542 nucleotides.
Regionstartendregion lengthphase at end
UTR
155,471,461155,471,585
Exon155,471,452155,471,46090
Exon155,469,981155,470,0871072
Exon155,468,863155,469,0051431
Exon155,468,163155,468,216541
Exon155,467,275155,467,365912
Exon155,466,988155,467,075880
Exon155,465,597155,465,6981020
Exon155,463,339155,463,431930
Exon155,461,937155,462,0861500
Exon155,461,746155,461,8471020
Exon155,461,103155,461,2051031
Exon155,460,257155,460,3651092
Exon155,459,121155,459,2601401
Exon155,458,438155,458,6311940
Exon155,457,837155,457,896600
UTR
155,456,149155,457,836