PLRG1 - pleiotropic regulator 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 13 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O43660 HGNC Approved Gene Symbol: PLRG1 
Ensembl ENSG00000171566 
Synonyms : PRL1, Prp46, PRPF46, Cwc1, TANGO4 Previous Names: "pleiotropic regulator 1 (PRL1, Arabidopsis homolog)", "pleiotropic regulator 1 (PRL1 homolog, Arabidopsis)"
HgncId : HGNC:9089  Omim: 605961 
Refseq: NM_002669  GenBank: AF044333 
 
Genomic coordinates: Cytogenetic location: 4q31.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PLRG1 Gene Structure

Chromosome: chr4
Genbank ID: NM_002669 Orientation: -
Length coding sequence : 1542 nucleotides.
Regionstartendregion lengthphase at end
UTR
154,550,309154,550,433
Exon154,550,300154,550,30890
Exon154,548,829154,548,9351072
Exon154,547,711154,547,8531431
Exon154,547,011154,547,064541
Exon154,546,123154,546,213912
Exon154,545,836154,545,923880
Exon154,544,445154,544,5461020
Exon154,542,187154,542,279930
Exon154,540,785154,540,9341500
Exon154,540,594154,540,6951020
Exon154,539,951154,540,0531031
Exon154,539,105154,539,2131092
Exon154,537,969154,538,1081401
Exon154,537,286154,537,4791940
Exon154,536,685154,536,744600
UTR
154,534,997154,536,684