POLR2B - RNA polymerase II subunit B

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 10 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P30876 HGNC Approved Gene Symbol: POLR2B 
Ensembl ENSG00000047315 
Synonyms : RPB2 Previous Names: "polymerase (RNA) II (DNA directed) polypeptide B (140kD)"
HgncId : HGNC:9188  Omim: 180661 
Refseq: NM_000938 
 
Genomic coordinates: Cytogenetic location: 4q12 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

POLR2B Gene Structure

Chromosome: chr4
Genbank ID: NM_000938 Orientation: +
Length coding sequence : 3522 nucleotides.
Regionstartendregion lengthphase at end
UTR57,844,80557,845,151
Exon57,845,15257,845,170191
Exon57,852,52057,852,592732
Exon57,856,91457,857,0641510
Exon57,860,57057,860,6821132
Exon57,860,81357,861,0322200
Exon57,861,41757,861,5751590
Exon57,865,78357,865,9471650
Exon57,871,41257,871,6081972
Exon57,871,76657,871,8851202
Exon57,872,98257,873,1681870
Exon57,876,52757,876,6701440
Exon57,876,91457,877,0531402
Exon57,877,15557,877,2661120
Exon57,881,66857,881,8221552
Exon57,883,20957,883,4071990
Exon57,883,72657,883,8941691
Exon57,887,06557,887,161972
Exon57,888,31857,888,412951
Exon57,889,49657,889,7462510
Exon57,889,82857,889,917900
Exon57,890,17157,890,2781080
Exon57,891,05257,891,1651140
Exon57,891,54357,891,7031612
Exon57,896,37057,896,5651960
Exon57,897,06557,897,154900
UTR57,897,15557,897,328