PRPF19 - pre-mRNA processing factor 19

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 11 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9UMS4 HGNC Approved Gene Symbol: PRPF19 
Previous Symbols: PRP19 Ensembl ENSG00000110107 
Synonyms : UBOX4, NMP200, PSO4, hPSO4, SNEV Previous Names: "PRP19/PSO4 homolog (S. cerevisiae)", "PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)"
HgncId : HGNC:17896  Omim: 608330 
Refseq: NM_014502  GenBank: BC018698 
 
Genomic coordinates: Cytogenetic location: 11q12.2 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PRPF19 Gene Structure

Chromosome: chr11
Genbank ID: NM_014502 Orientation: -
Length coding sequence : 1512 nucleotides.
Regionstartendregion lengthphase at end
UTR
60,673,85560,674,061
Exon60,673,83660,673,854191
Exon60,671,18460,671,3331501
Exon60,670,93160,671,007770
Exon60,670,21260,670,3531421
Exon60,670,05560,670,128740
Exon60,669,87560,669,937630
Exon60,668,97160,669,012420
Exon60,668,76760,668,841750
Exon60,668,32660,668,401761
Exon60,668,05460,668,1631100
Exon60,666,62160,666,7761560
Exon60,666,33460,666,403701
Exon60,666,01360,666,098860
Exon60,665,57360,665,7431710
Exon60,665,31860,665,4231061
Exon60,658,63860,658,735980
UTR
60,658,02060,658,637