PRPF4 - pre-mRNA processing factor 4

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 6 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O43172 HGNC Approved Gene Symbol: PRPF4 
Ensembl ENSG00000136875 
Synonyms : Prp4p, HPRP4, HPRP4P, PRP4, SNRNP60 Previous Names: "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
HgncId : HGNC:17349  Omim: 607795 
Refseq: NM_004697  GenBank: AF001687 
 
Fullscreen
Dalliance goes here...

This feature requires an up-to-date web browser.

Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PRPF4 Gene Structure

Chromosome: chr9
Genbank ID: NM_004697 Orientation: +
Length coding sequence : 1566 nucleotides.
Regionstartendregion lengthphase at end
UTR116,037,913116,038,023
Exon116,038,024116,038,050270
Exon116,038,825116,039,0051811
Exon116,041,225116,041,4111872
Exon116,044,926116,045,013880
Exon116,045,412116,045,491802
Exon116,045,669116,045,762940
Exon116,046,575116,046,669952
Exon116,048,512116,048,570591
Exon116,048,985116,049,1081242
Exon116,050,455116,050,544902
Exon116,052,746116,052,8681232
Exon116,052,980116,053,0871082
Exon116,053,178116,053,2961191
Exon116,053,747116,053,9401940
UTR116,053,941116,055,185