PSMD1 - proteasome 26S subunit, non-ATPase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 32 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q99460 HGNC Approved Gene Symbol: PSMD1 
Ensembl ENSG00000173692 
Synonyms : S1, P112, Rpn2 Previous Names: "proteasome (prosome, macropain) 26S subunit, non-ATPase, 1"
HgncId : HGNC:9554 
GenBank: D44466 
 
Genomic coordinates: Cytogenetic location: 2q37.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PSMD1 Gene Structure

Chromosome: chr2
Genbank ID: NM_001191037 Orientation: +
Length coding sequence : 2766 nucleotides.
Regionstartendregion lengthphase at end
UTR231,921,577231,921,739
Exon231,921,740231,921,755161
Exon231,925,981231,926,024440
Exon231,926,962231,927,035742
Exon231,927,220231,927,3891701
Exon231,931,620231,931,8252060
Exon231,934,739231,934,8821440
Exon231,936,903231,937,1292272
Exon231,940,225231,940,285610
Exon231,941,748231,941,8761290
Exon231,943,373231,943,461892
Exon231,944,250231,944,328790
Exon231,944,855231,945,0281740
Exon231,947,597231,947,7081121
Exon231,948,281231,948,4771970
Exon231,949,733231,949,828960
Exon231,951,831231,951,895652
Exon232,003,450232,003,5641150
Exon232,010,954232,011,0701170
Exon232,018,278232,018,3801031
Exon232,026,054232,026,2231700
Exon232,029,914232,030,000870
Exon232,030,585232,030,7311470
Exon232,035,280232,035,4261470
UTR232,035,427232,035,435