RARA - retinoic acid receptor alpha

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for RARA View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P10276 HGNC Approved Gene Symbol: RARA 
Ensembl ENSG00000131759 
Synonyms : RAR, NR1B1 Previous Names: "retinoic acid receptor, alpha"
HgncId : HGNC:9864  Omim: 180240 
GenBank: X06538 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

RARA Gene Structure

Chromosome: chr17
Genbank ID: NM_000964 Orientation: +
Length coding sequence : 1386 nucleotides.
Regionstartendregion lengthphase at end
UTR38,487,10838,487,470
Exon38,487,47138,487,6481781
Exon38,504,56838,504,7161490
Exon38,506,03638,506,1771421
Exon38,508,16238,508,3221610
Exon38,508,58338,508,7591770
Exon38,510,55438,510,7582051
Exon38,511,51538,511,6731591
Exon38,512,26138,512,4782180
UTR38,512,47938,513,895