SCN4A - sodium voltage-gated channel alpha subunit 4

 

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Cross References
UniProt: P35499 HGNC Approved Gene Symbol: SCN4A 
Previous Symbols: HYKPP Ensembl ENSG00000007314 
Synonyms : Nav1.4, HYPP, SkM1 Previous Names: "sodium channel, voltage-gated, type IV, alpha subunit", "sodium channel, voltage gated, type IV alpha subunit"
HgncId : HGNC:10591  Omim: 603967 
Refseq: NM_000334  GenBank: U24693 
 
Genomic coordinates: Cytogenetic location: 17q23.3 reset view
Currently highlighted: Genomic position: chr17:62,048,613 View in genomic position mapping tool
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The genome browser is based on Biodalliance browser  
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Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SCN4A Gene Structure

Chromosome: chr17
Genbank ID: NM_000334 Orientation: -
Length coding sequence : 5508 nucleotides.
Regionstartendregion lengthphase at end
UTR
62,050,20262,050,278
Exon62,049,92962,050,2012730
Exon62,049,71262,049,8301192
Exon62,049,49662,049,585902
Exon62,049,08262,049,2101292
Exon62,048,52262,048,613921
Exon62,045,38362,045,7153331
Exon62,043,84162,043,904642
Exon62,043,46262,043,6031420
Exon62,041,82862,042,0372100
Exon62,041,03262,041,1851541
Exon62,038,55362,038,7912390
Exon62,036,62562,036,7981740
Exon62,034,52262,034,8783570
Exon62,028,78462,029,2604770
Exon62,026,75362,026,8881361
Exon62,025,97162,026,1251550
Exon62,025,25062,025,4231740
Exon62,024,40562,024,5271230
Exon62,022,72062,022,9982790
Exon62,022,36762,022,420540
Exon62,022,03362,022,1701380
Exon62,021,10662,021,2101050
Exon62,020,18662,020,4562711
Exon62,018,13162,019,35312230
UTR
62,015,91462,018,130