SETD5 - SET domain containing 5

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: no matching PDB entities View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9C0A6 HGNC Approved Gene Symbol: SETD5 
Ensembl ENSG00000168137 
Synonyms : FLJ10707
HgncId : HGNC:25566  Omim: 615743 
Refseq: XM_371614  GenBank: BC020956 
 
Genomic coordinates: Cytogenetic location: 3p25.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SETD5 Gene Structure

Chromosome: chr3
Genbank ID: NM_001080517 Orientation: +
Length coding sequence : 4326 nucleotides.
Regionstartendregion lengthphase at end
UTR9,470,5069,470,622
Exon9,470,6239,470,693712
Exon9,475,5299,475,6341060
Exon9,476,0189,476,1691522
Exon9,476,5089,476,566591
Exon9,477,4129,477,5901790
Exon9,482,1409,482,3822430
Exon9,483,2779,483,4251492
Exon9,483,8129,483,9291180
Exon9,484,9929,485,1011102
Exon9,486,7329,486,9842530
Exon9,487,3419,487,424840
Exon9,488,7349,488,9912580
Exon9,489,3709,489,6903210
Exon9,490,0729,490,3142430
Exon9,495,4239,495,5521301
Exon9,506,1099,506,3562480
Exon9,512,1439,512,6134710
Exon9,514,9209,515,2213022
Exon9,516,1339,516,2661341
Exon9,516,7529,516,840890
Exon9,517,1679,517,7756090
UTR9,517,7769,519,838