SF3A2 - splicing factor 3a subunit 2

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q15428 HGNC Approved Gene Symbol: SF3A2 
Ensembl ENSG00000104897 
Synonyms : SF3a66, SAP62, PRPF11, Prp11 Previous Names: "splicing factor 3a, subunit 2, 66kD", "splicing factor 3a, subunit 2, 66kDa"
HgncId : HGNC:10766  Omim: 600796 
GenBank: L21990 
 
Genomic coordinates: Cytogenetic location: 19p13.3 reset view
Currently highlighted: Genomic position: chr19:2,247,022 View in genomic position mapping tool
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SF3A2 Gene Structure

Chromosome: chr19
Genbank ID: NM_007165 Orientation: +
Length coding sequence : 1392 nucleotides.
Regionstartendregion lengthphase at end
UTR2,243,3812,243,418
Exon2,243,4192,243,5441260
Exon2,244,5442,244,615720
Exon2,244,7332,244,779472
Exon2,245,4462,245,5551101
Exon2,246,7532,246,802500
Exon2,246,8822,247,0221410
Exon2,247,5942,247,662690
Exon2,247,7672,248,5467800
UTR2,248,5472,248,679