SF3B3 - splicing factor 3b subunit 3

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 11 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q15393 HGNC Approved Gene Symbol: SF3B3 
Ensembl ENSG00000189091 
Synonyms : SAP130, SF3b130, RSE1, KIAA0017 Previous Names: "splicing factor 3b, subunit 3, 130kD", "splicing factor 3b, subunit 3, 130kDa"
HgncId : HGNC:10770  Omim: 605592 
Refseq: NM_012426  GenBank: AJ001443 
 
Genomic coordinates: Cytogenetic location: 16q22.1 reset view
Fullscreen
Dalliance goes here...

This feature requires an up-to-date web browser.

Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SF3B3 Gene Structure

Chromosome: chr16〉e=70572226
Genbank ID: NM_012426 Orientation: +
Length coding sequence : 3651 nucleotides.
Regionstartendregion lengthphase at end
UTR70,560,48970,560,559
Exon70,560,56070,560,629701
Exon70,562,77670,563,1023271
Exon70,564,64870,564,8201730
Exon70,566,38270,566,5231421
Exon70,569,21170,569,3231130
Exon70,572,22670,572,3631380
Exon70,573,00770,573,1101042
Exon70,575,57270,575,7371660
Exon70,578,34170,578,436960
Exon70,582,27370,582,345731
Exon70,588,34970,588,5001520
Exon70,588,95470,589,1091560
Exon70,590,08270,590,2371560
Exon70,590,78970,590,9321440
Exon70,594,37270,594,4941230
Exon70,595,53370,595,6871552
Exon70,597,77970,597,9531750
Exon70,598,96870,599,1732062
Exon70,599,27170,599,4271570
Exon70,601,31470,601,4391260
Exon70,602,18670,602,3982130
Exon70,602,94670,603,044990
Exon70,603,90970,604,0521440
Exon70,604,99870,605,1021050
Exon70,605,57670,605,7161410
UTR70,605,71770,611,571