SNRNP200 - small nuclear ribonucleoprotein U5 subunit 200

 

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Cross References
UniProt: O75643 HGNC Approved Gene Symbol: SNRNP200 
Previous Symbols: ASCC3L1, RP33 Ensembl ENSG00000144028 
Synonyms : U5-200KD, HELIC2, KIAA0788, BRR2 Previous Names: "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)", "small nuclear ribonucleoprotein 200kDa (U5)", "small nuclear ribonucleoprotein, U5 200kDa subunit"
HgncId : HGNC:30859  Omim: 601664 
Refseq: NM_014014  GenBank: AL831994 
 
Genomic coordinates: Cytogenetic location: 2q11.2 reset view
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The genome browser is based on Biodalliance browser  
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Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SNRNP200 Gene Structure

Chromosome: chr2
Genbank ID: NM_014014 Orientation: -
Length coding sequence : 6408 nucleotides.
Regionstartendregion lengthphase at end
UTR
96,305,43896,305,569
Exon96,305,39396,305,437450
Exon96,304,70596,304,8681642
Exon96,303,15996,303,3301720
Exon96,301,52496,301,7161931
Exon96,300,99896,301,053560
Exon96,299,32996,299,427990
Exon96,298,81596,298,9671530
Exon96,298,60396,298,7021001
Exon96,298,28496,298,4201370
Exon96,297,63796,297,720840
Exon96,297,36396,297,5361740
Exon96,296,93396,297,0701380
Exon96,296,53696,296,6911560
Exon96,295,48896,295,6581710
Exon96,293,31696,293,5091942
Exon96,292,97296,293,0951240
Exon96,291,75196,291,9001500
Exon96,291,39296,291,5021110
Exon96,290,68496,290,8151320
Exon96,290,32696,290,5141890
Exon96,289,79996,289,9961980
Exon96,289,22796,289,3791530
Exon96,289,03796,289,117810
Exon96,288,66396,288,746840
Exon96,287,86396,287,9691072
Exon96,287,43996,287,5571191
Exon96,287,00696,287,1601550
Exon96,286,68896,286,8771901
Exon96,286,31196,286,4841741
Exon96,285,18096,285,3401610
Exon96,284,35896,284,5852280
Exon96,283,81396,284,0041920
Exon96,283,53596,283,7131792
Exon96,283,20196,283,3521521
Exon96,281,81496,281,9221092
Exon96,279,45196,279,5591090
Exon96,278,80996,278,9981901
Exon96,278,54796,278,7111651
Exon96,278,23796,278,3581220
Exon96,277,80796,277,9501440
Exon96,277,53996,277,7151770
Exon96,277,08196,277,2411612
Exon96,276,90496,276,985820
Exon96,275,25796,275,349930
Exon96,275,01296,275,1551440
UTR
96,274,33696,275,011