VCL - vinculin

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for VCL View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P18206 HGNC Approved Gene Symbol: VCL 
Ensembl ENSG00000035403 
HgncId : HGNC:12665  Omim: 193065 
Refseq: NM_003373, NM_014000  GenBank: M33308 
 
Genomic coordinates: Cytogenetic location: 10q22.2 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

VCL Gene Structure

Chromosome: chr10
Genbank ID: NM_003373 Orientation: +
Length coding sequence : 3198 nucleotides.
Regionstartendregion lengthphase at end
UTR75,757,87175,757,965
Exon75,757,96675,758,1331680
Exon75,802,84175,802,911712
Exon75,830,42875,830,5781510
Exon75,830,73375,830,8411091
Exon75,832,48875,832,6101231
Exon75,834,50175,834,6611610
Exon75,842,21275,842,302911
Exon75,843,12475,843,2711482
Exon75,848,95475,849,1071540
Exon75,849,78175,849,9561762
Exon75,854,02975,854,2191911
Exon75,855,41475,855,6132000
Exon75,856,96275,857,0901290
Exon75,860,70675,860,8551500
Exon75,863,57875,863,6861091
Exon75,864,80975,865,1113031
Exon75,866,98875,867,1121250
Exon75,868,72975,868,9141860
Exon75,873,94275,874,1452040
Exon75,874,55375,874,6571050
Exon75,877,78175,877,9271470
UTR75,877,92875,879,914