VCP - valosin containing protein

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 42 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P55072 HGNC Approved Gene Symbol: VCP 
Ensembl ENSG00000165280 
Synonyms : IBMPFD, p97, CDC48, TERA Previous Names: "valosin-containing protein"
HgncId : HGNC:12666  Omim: 601023 
Refseq: NM_007126  GenBank: AC004472 
 
Genomic coordinates: Cytogenetic location: 9p13.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

VCP Gene Structure

Chromosome: chr9
Genbank ID: NM_007126 Orientation: -
Length coding sequence : 2418 nucleotides.
Regionstartendregion lengthphase at end
UTR
35,072,35435,072,742
Exon35,072,33735,072,353172
Exon35,068,25135,068,3621120
Exon35,067,89135,068,0631732
Exon35,066,67535,066,8171431
Exon35,065,25135,065,3811310
Exon35,064,15435,064,2851320
Exon35,062,97835,063,0801031
Exon35,062,21735,062,3501340
Exon35,062,00335,062,1381361
Exon35,061,57735,061,6891130
Exon35,061,01535,061,1791650
Exon35,060,80135,060,9231230
Exon35,060,31335,060,5252130
Exon35,059,49335,059,8013090
Exon35,059,06435,059,2191560
Exon35,057,37635,057,5301552
Exon35,057,11735,057,2221060
UTR
35,056,06835,057,116