5YJZ

The native crystal structure of Rv3197 from Mycobacterium tuberculosis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.16 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.176 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Discovery of the first macrolide antibiotic binding protein in Mycobacterium tuberculosis: a new antibiotic resistance drug target.

Zhang, Q.Liu, H.Liu, X.Jiang, D.Zhang, B.Tian, H.Yang, C.Guddat, L.W.Yang, H.Mi, K.Rao, Z.

(2018) Protein Cell --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Probable conserved ATP-binding protein ABC transporter
A
452Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Find proteins for O53343 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Go to UniProtKB:  O53343
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.16 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.176 
  • Space Group: P 63 2 2
Unit Cell:
Length (Å)Angle (°)
a = 187.290α = 90.00
b = 187.290β = 90.00
c = 67.609γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data reduction
HKL-2000data scaling
PHENIXrefinement
AutoSolphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2017-10-11 
  • Released Date: 2018-02-07 
  • Deposition Author(s): Zhang, Q.Q., Rao, Z.H.

Funding OrganizationCountryGrant Number
State Key Development Program for Basic Research of the Ministry of Science and Technology of ChinaChina2014CB542800
National Natural Science Foundation of ChinaChina81330036
National Natural Science Foundation of ChinaChina81520108019

Revision History 

  • Version 1.0: 2018-02-07
    Type: Initial release