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Download EndnoteCrystal structure of bacterial serine phosphatase
Yang, C.-G., Yang, T.To be published.
6IHT
Crystal structure of bacterial serine phosphatase bound with phosphorylated peptide
- DOI: 10.2210/pdb6IHT/pdb
- Classification: HYDROLASE
- Organism(s): Staphylococcus aureus
- Expression System: Escherichia coli
- Deposited: 2018-10-02 Released: 2019-08-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.569 Å
- R-Value Free: 0.183
- R-Value Work: 0.159
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Phosphorylated protein phosphatase | A | 266 | Staphylococcus aureus | Mutation(s): 0 Gene Names: prpC_1 (prpC) EC: 3.1.3.16 |
Find proteins for Q9RL81 (Staphylococcus aureus) Go to UniProtKB: Q9RL81 | ||||
Entity ID: 2 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| His12 | X | 3 | N/A | Mutation(s): 0 |
| Protein Feature View is not available: No corresponding UniProt sequence found. | ||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MN Query on MN | A | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |  | Ligand Interaction | |
| MG Query on MG | A | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| SEP Query on SEP | X | L-PEPTIDE LINKING | C3 H8 N O6 P |  | SER |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.569 Å
- R-Value Free: 0.183
- R-Value Work: 0.159
- Space Group: P 1 21 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 46.693 | α = 90.00 |
| b = 38.609 | β = 101.89 |
| c = 65.003 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| PHASER | phasing |
| HKL-3000 | data scaling |
| HKL-3000 | data reduction |
| PHENIX | refinement |
Entry History
Deposition Data
- Deposited Date: 2018-10-02
- Released Date: 2019-08-07
- Deposition Author(s): Yang, C.-G., yang, T.
